RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 FTOQ9C0B1 505 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFPL3-202ENST00000397468 NKX2-4Q9H2Z4 354 aa11.32□□□□□ -0.6
RFPL3-202ENST00000397468 CNNM2Q9H8M5 875 aa11.32□□□□□ -0.6
RFPL3-202ENST00000397468 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
RFPL3-202ENST00000397468 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
RFPL3-202ENST00000397468 KPNA6O60684 536 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 PFKMP08237 780 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 SNHG28P0DPA3 235 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 NUCB1Q02818 461 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 TRDNQ13061 729 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 BFSP2Q13515 415 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 CCDC85BQ15834 202 aaPredicted RBP11.31□□□□□ -0.6
RFPL3-202ENST00000397468 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 IFIT1BQ5T764 474 aaKnown RBP11.31□□□□□ -0.6
RFPL3-202ENST00000397468 ARHGEF16Q5VV41 709 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
RFPL3-202ENST00000397468 COPS5Q92905 334 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
RFPL3-202ENST00000397468 GRIN2DO15399 1336 aa11.31□□□□□ -0.6
RFPL3-202ENST00000397468 ERICH2A1L162 156 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 CFBP00751 764 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 GH1P01241 217 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 ATP2A2P16615 1042 aaKnown RBP11.3□□□□□ -0.6
RFPL3-202ENST00000397468 RABGGTBP53611 331 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 STXBP2Q15833 593 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 NFRKBQ6P4R8 1299 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 ADGRF4Q8IZF3 695 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 EXOC6Q8TAG9 804 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 RMDN3Q96TC7 470 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
RFPL3-202ENST00000397468 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
RFPL3-202ENST00000397468 VCANP13611 3396 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 RBM47A0AV96 593 aaKnown RBP11.29□□□□□ -0.6
RFPL3-202ENST00000397468 IGHDP01880 384 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
RFPL3-202ENST00000397468 EDNRBP24530 442 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 KCNJ6P48051 423 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
RFPL3-202ENST00000397468 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 TJAP1Q5JTD0 557 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
RFPL3-202ENST00000397468 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 OSBPL3Q9H4L5 887 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 THEGQ9P2T0 379 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
RFPL3-202ENST00000397468 BAZ2BQ9UIF8 2168 aaKnown RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 ARIH2O95376 493 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 MMP3P08254 477 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 RFC2P35250 354 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 PTPN11Q06124 597 aaPredicted RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 PTGISQ16647 500 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 TMEM67Q5HYA8 995 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 C7orf31Q8N865 590 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 IWS1Q96ST2 819 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 ALG1Q9BT22 464 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 AMNQ9BXJ7 453 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 YBX2Q9Y2T7 364 aaKnown RBP11.28□□□□□ -0.6
RFPL3-202ENST00000397468 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
RFPL3-202ENST00000397468 CHD9Q3L8U1 2897 aa11.27□□□□□ -0.6
RFPL3-202ENST00000397468 TTC28Q96AY4 2481 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 A6NJR5 290 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
RFPL3-202ENST00000397468 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
RFPL3-202ENST00000397468 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
RFPL3-202ENST00000397468 MYOGP15173 224 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 TRAF1Q13077 416 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 DGKDQ16760 1214 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 DHX37Q8IY37 1157 aaKnown RBP11.27□□□□□ -0.61
RFPL3-202ENST00000397468 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
RFPL3-202ENST00000397468 SLC9A7Q96T83 725 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 KATNAL1Q9BW62 490 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 MAF1Q9H063 256 aa11.27□□□□□ -0.61
RFPL3-202ENST00000397468 TET1Q8NFU7 2136 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
RFPL3-202ENST00000397468 ZBTB5O15062 677 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 SORBS3O60504 671 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 CA3P07451 260 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
RFPL3-202ENST00000397468 JMJD4Q9H9V9 463 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms