RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TOP1P11387 765 aaKnown RBP10.32□□□□□ -0.76
CAPN3-208ENST00000397204 POU3F3P20264 500 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-208ENST00000397204 PSMC6P62333 389 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 HIC1Q14526 733 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 CCDC85BQ15834 202 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-208ENST00000397204 TMEM63BQ5T3F8 832 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 FBXO16Q8IX29 292 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-208ENST00000397204 TTC14Q96N46 770 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 DDX49Q9Y6V7 483 aaKnown RBP10.32□□□□□ -0.76
CAPN3-208ENST00000397204 MYH7P12883 1935 aa10.32□□□□□ -0.76
CAPN3-208ENST00000397204 B4DLN1 442 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 TULP1O00294 542 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 NKRFO15226 690 aaKnown RBP eCLIP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 ACTN1P12814 892 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 ATP2A2P16615 1042 aaKnown RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MX1P20591 662 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 SLC16A2P36021 539 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 ALDH5A1P51649 535 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MRPL12P52815 198 aaKnown RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 PURAQ00577 322 aaKnown RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 CCDC96Q2M329 555 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 SYDE2Q5VT97 1194 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 TTBK2Q6IQ55 1244 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 RGS22Q8NE09 1264 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 DNERQ8NFT8 737 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 PHOSPHO2Q8TCD6 241 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 EVI5LQ96CN4 794 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 VWCEQ96DN2 955 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 SCLYQ96I15 445 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 PURBQ96QR8 312 aaKnown RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MPHOSPH6Q99547 160 aaKnown RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MTG1Q9BT17 334 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MAF1Q9H063 256 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 HELLSQ9NRZ9 838 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MTMR7Q9Y216 660 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 TNKSO95271 1327 aa10.31□□□□□ -0.76
CAPN3-208ENST00000397204 MCM3APO60318 1980 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 PTPDC1A2A3K4 754 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 A6NJR5 290 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 ZBBXA8MT70 800 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 NFIBO00712 420 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 FGAP02671 866 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 MYL3P08590 195 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 CYP2C9P11712 490 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 FECHP22830 423 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 PTGS1P23219 599 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 RFC2P35250 354 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 RABGGTBP53611 331 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 PTPN11Q06124 597 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-208ENST00000397204 PDE4DQ08499 809 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 AAK1Q2M2I8 961 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 NBPF20Q3BBV1 942 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 TMEM67Q5HYA8 995 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 NFRKBQ6P4R8 1299 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 RNF207Q6ZRF8 634 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 RETREG2Q8NC44 543 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 OTUD7AQ8TE49 926 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-208ENST00000397204 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 SCFD2Q8WU76 684 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 CLEC4DQ8WXI8 215 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 UHRF1Q96T88 793 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-208ENST00000397204 TMEM47Q9BQJ4 181 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 TOMM22Q9NS69 142 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 TRMT13Q9NUP7 481 aaKnown RBP10.3□□□□□ -0.76
CAPN3-208ENST00000397204 ADGRG1Q9Y653 693 aa10.3□□□□□ -0.76
CAPN3-208ENST00000397204 MYH4Q9Y623 1939 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 KIF28PB7ZC32 967 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 PCP11498 1178 aaKnown RBP10.29□□□□□ -0.76
CAPN3-208ENST00000397204 BMP1P13497 986 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 MYOGP15173 224 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 EDNRBP24530 442 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 CALML3P27482 149 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 BFSP2Q13515 415 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 TTLL4Q14679 1199 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 VPS53Q5VIR6 699 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 OR6J1Q8NGC5 347 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 REV3LO60673 3130 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 RAD50Q92878 1312 aa10.29□□□□□ -0.76
CAPN3-208ENST00000397204 SNHG28P0DPA3 235 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 TXNP10599 105 aaKnown RBP10.28□□□□□ -0.76
CAPN3-208ENST00000397204 PDHBP11177 359 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 RPS6P62753 249 aaKnown RBP10.28□□□□□ -0.76
CAPN3-208ENST00000397204 ZNF543Q08ER8 600 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 PPP2R5BQ15173 497 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 MCMDC2Q4G0Z9 681 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 FAM47CQ5HY64 1035 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 RRP12Q5JTH9 1297 aaKnown RBP10.28□□□□□ -0.76
CAPN3-208ENST00000397204 ANKRD45Q5TZF3 282 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 MFSD6Q6ZSS7 791 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 RASGRP2Q7LDG7 609 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 DEFB128Q7Z7B8 93 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 SLC9A7Q96T83 725 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 TSR3Q9UJK0 312 aaKnown RBP10.28□□□□□ -0.76
CAPN3-208ENST00000397204 WDR19Q8NEZ3 1342 aa10.28□□□□□ -0.76
CAPN3-208ENST00000397204 SALL3Q9BXA9 1300 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms