RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 GOLGA6L6A8MZA4 724 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 WNT7AO00755 349 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 EDIL3O43854 480 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 TTC38Q5R3I4 469 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 PRIMPOLQ96LW4 560 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 FTOQ9C0B1 505 aaKnown RBP eCLIP16.81■□□□□ 0.286e-6■□□□□ 9
TM9SF1-202ENST00000396854 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 PCDHB6Q9Y5E3 794 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 YEATS4O95619 227 aa16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 MAPK4P31152 587 aa16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 USP11P51784 963 aa16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 ORC2Q13416 577 aaPredicted RBP16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 CLIC4Q9Y696 253 aa16.8■□□□□ 0.28
TM9SF1-202ENST00000396854 CYP3A4P08684 503 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 MOXD1Q6UVY6 613 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 ABRAQ8N0Z2 381 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 MYRIPQ8NFW9 859 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 TAAR1Q96RJ0 339 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 MMP19Q99542 508 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 MORC2Q9Y6X9 1032 aaPredicted RBP16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 DNAJC25-GNG10A0A024R161 153 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 STRNO43815 780 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 NR1I2O75469 434 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 FCER1AP12319 257 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 KCTD2Q14681 263 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 PTPAQ15257 358 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 ANO6Q4KMQ2 910 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 CKAP2LQ8IYA6 745 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 NAP1L4Q99733 375 aaKnown RBP16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 CBX8Q9HC52 389 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 PXMP2Q9NR77 195 aa16.79■□□□□ 0.28
TM9SF1-202ENST00000396854 DOCK3Q8IZD9 2030 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 BMP15O95972 392 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 GCFC2P16383 781 aaKnown RBP16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 CIITAP33076 1130 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 LETM2Q2VYF4 491 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 PPP4R3AQ6IN85 833 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 FAM133AQ8N9E0 248 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 LINC00301Q8NCQ3 95 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 DNERQ8NFT8 737 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 KIAA1524Q8TCG1 905 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 MBOAT7Q96N66 472 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 RMDN3Q96TC7 470 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
TM9SF1-202ENST00000396854 CYP3A7-CYP3A51PA0A087WV96 503 aa16.77■□□□□ 0.28
TM9SF1-202ENST00000396854 CYP3A7P24462 503 aa16.77■□□□□ 0.28
TM9SF1-202ENST00000396854 CEBPZQ03701 1054 aaKnown RBP16.77■□□□□ 0.28
TM9SF1-202ENST00000396854 LUZP1Q86V48 1076 aa16.77■□□□□ 0.28
TM9SF1-202ENST00000396854 CCAR1Q8IX12 1150 aaKnown RBP16.77■□□□□ 0.28
TM9SF1-202ENST00000396854 POTEB2H3BUK9 544 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 CAVIN2O95810 425 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 PTPREP23469 700 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 SLC39A14Q15043 492 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 PGM5Q15124 567 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 KCNG4Q8TDN1 519 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 NSUN6Q8TEA1 469 aaKnown RBP16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 PURBQ96QR8 312 aaKnown RBP16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 PDCD2LQ9BRP1 358 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 RNF186Q9NXI6 227 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 IVNS1ABPQ9Y6Y0 642 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 ZSWIM8A7E2V4 1837 aa16.77■□□□□ 0.27
TM9SF1-202ENST00000396854 KIAA1217Q5T5P2 1943 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 TDP2O95551 362 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 MCM7P33993 719 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 GRB14Q14449 540 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 STK38Q15208 465 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 ZNF174Q15697 407 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 ARHGEF16Q5VV41 709 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 PCNX4Q63HM2 1172 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 MTERF4Q7Z6M4 381 aaKnown RBP16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 PLEKHH3Q7Z736 793 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 ASTN1O14525 1302 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 GTF2F1P35269 517 aaKnown RBP eCLIP16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 ATP2C1P98194 919 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 CNTN2Q02246 1040 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 XRRA1Q6P2D8 792 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 C17orf53Q8N3J3 647 aaPredicted RBP16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 FAM13BQ9NYF5 915 aa16.76■□□□□ 0.27
TM9SF1-202ENST00000396854 MCM3APO60318 1980 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 LOC102724159A0A0B4J2E5 919 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 PPP6R2O75170 966 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 ALDH5A1P51649 535 aaPredicted RBP16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 UBXN2AP68543 259 aa16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 PWP2Q15269 919 aaKnown RBP16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.75■□□□□ 0.27
TM9SF1-202ENST00000396854 C4orf32Q8N8J7 132 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms