RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 GNPTABQ3T906 1256 aa18.98■□□□□ 0.63
DDR1-229ENST00000396342 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
DDR1-229ENST00000396342 PHOSPHO2Q8TCD6 241 aa18.98■□□□□ 0.63
DDR1-229ENST00000396342 CUL5Q93034 780 aa18.98■□□□□ 0.63
DDR1-229ENST00000396342 ZBED2Q9BTP6 218 aa18.98■□□□□ 0.63
DDR1-229ENST00000396342 BAIAP3O94812 1187 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 IQCF3P0C7M6 154 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 TJAP1Q5JTD0 557 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 CCDC62Q6P9F0 684 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 PPTC7Q8NI37 304 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 CTCFLQ8NI51 663 aaPredicted RBP18.97■□□□□ 0.63
DDR1-229ENST00000396342 TBC1D5Q92609 795 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 MLXIPQ9HAP2 919 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
DDR1-229ENST00000396342 DNAH12Q6ZR08 3092 aa18.97■□□□□ 0.63
DDR1-229ENST00000396342 TGFB3P10600 412 aa18.96■□□□□ 0.63
DDR1-229ENST00000396342 NFXL1Q6ZNB6 911 aa18.96■□□□□ 0.63
DDR1-229ENST00000396342 TMTC2Q8N394 836 aa18.96■□□□□ 0.63
DDR1-229ENST00000396342 ATXN2LQ8WWM7 1075 aaKnown RBP18.96■□□□□ 0.63
DDR1-229ENST00000396342 EMID1Q96A84 441 aaPredicted RBP18.96■□□□□ 0.63
DDR1-229ENST00000396342 SPATA33Q96N06 139 aa18.96■□□□□ 0.63
DDR1-229ENST00000396342 ALG1Q9BT22 464 aa18.96■□□□□ 0.63
DDR1-229ENST00000396342 THEGQ9P2T0 379 aa18.96■□□□□ 0.63
DDR1-229ENST00000396342 DDX41Q9UJV9 622 aaKnown RBP18.96■□□□□ 0.63
DDR1-229ENST00000396342 MCM3APO60318 1980 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 PNMA6FA0A0J9YX94 578 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 NOP56O00567 594 aaKnown RBP18.95■□□□□ 0.62
DDR1-229ENST00000396342 EFCAB14O75071 495 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 PPFIA4O75335 1185 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 ARIH2O95376 493 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 SELPP16109 830 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 CHMLP26374 656 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 PSEN2P49810 448 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 HSD17B4P51659 736 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 RABGGTBP53611 331 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 ARHGAP1Q07960 439 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 GRM4Q14833 912 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 SKIV2LQ15477 1246 aaKnown RBP18.95■□□□□ 0.62
DDR1-229ENST00000396342 AAK1Q2M2I8 961 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 SESTD1Q86VW0 696 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 FCHSD1Q86WN1 690 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 MICALL1Q8N3F8 863 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 STAG2Q8N3U4 1231 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 RRP36Q96EU6 259 aaKnown RBP18.95■□□□□ 0.62
DDR1-229ENST00000396342 MAD2L2Q9UI95 211 aa18.95■□□□□ 0.62
DDR1-229ENST00000396342 PALM3A6NDB9 673 aaPredicted RBP18.94■□□□□ 0.62
DDR1-229ENST00000396342 STAM2O75886 525 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 GNAQP50148 359 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 MRPS5P82675 430 aaKnown RBP18.94■□□□□ 0.62
DDR1-229ENST00000396342 MFSD10Q14728 455 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 SEC23AQ15436 765 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 CCDC85BQ15834 202 aaPredicted RBP18.94■□□□□ 0.62
DDR1-229ENST00000396342 KIAA0753Q2KHM9 967 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 LRRC8DQ7L1W4 858 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 LZTS2Q9BRK4 669 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 PDCD2LQ9BRP1 358 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 COL20A1Q9P218 1284 aa18.94■□□□□ 0.62
DDR1-229ENST00000396342 CCDC69A6NI79 296 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 E7EWF7 191 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 TLL1O43897 1013 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 HOXA13P31271 388 aaPredicted RBP18.93■□□□□ 0.62
DDR1-229ENST00000396342 STOX1Q6ZVD7 989 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 CYB5R4Q7L1T6 521 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 SMARCC2Q8TAQ2 1214 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 PIGSQ96S52 555 aa18.93■□□□□ 0.62
DDR1-229ENST00000396342 YBX2Q9Y2T7 364 aaKnown RBP18.93■□□□□ 0.62
DDR1-229ENST00000396342 GGPS1O95749 300 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 CYP21A2P08686 494 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 GNAT1P11488 350 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 GSPT1P15170 499 aaKnown RBP18.92■□□□□ 0.62
DDR1-229ENST00000396342 PTK7Q13308 1070 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 IKBKEQ14164 716 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 PGM5Q15124 567 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 SYNE3Q6ZMZ3 975 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 VSIG10LQ86VR7 867 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
DDR1-229ENST00000396342 CA3P07451 260 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 CALM1P0DP23 149 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 CALM2P0DP24 149 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 CALM3P0DP25 149 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 NEDD9Q14511 834 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 CELF3Q5SZQ8 465 aaKnown RBP18.91■□□□□ 0.62
DDR1-229ENST00000396342 GDF6Q6KF10 455 aaPredicted RBP18.91■□□□□ 0.62
DDR1-229ENST00000396342 CNKSR3Q6P9H4 555 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 HERC6Q8IVU3 1022 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 PPP1R13LQ8WUF5 828 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 PIBF1Q8WXW3 757 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 MTMR8Q96EF0 704 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 RIOX1Q9H6W3 641 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 ZNF215Q9UL58 517 aaPredicted RBP18.91■□□□□ 0.62
DDR1-229ENST00000396342 EMSYQ7Z589 1322 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 CUL9Q8IWT3 2517 aa18.91■□□□□ 0.62
DDR1-229ENST00000396342 ABHD14A-ACY1A0A1B0GW23 586 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 SGSM2O43147 1006 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 DDAH1O94760 285 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 ZNF286BP0CG31 522 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 PDE4AP27815 886 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 MCM5P33992 734 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 GHRHRQ02643 423 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms