RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HAS1Q92839 578 aa23.08■■□□□ 1.29
VCPKMT-202ENST00000395860 PURBQ96QR8 312 aaKnown RBP23.08■■□□□ 1.29
VCPKMT-202ENST00000395860 KCNMB3Q9NPA1 279 aa23.08■■□□□ 1.29
VCPKMT-202ENST00000395860 SYCE3A1L190 88 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 TBX3O15119 743 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 TXLNAP40222 546 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 PCNX4Q63HM2 1172 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 SLFN12Q8IYM2 578 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 GPRC5AQ8NFJ5 357 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 CYP2W1Q8TAV3 490 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 LENG9Q96B70 501 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 AK8Q96MA6 479 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 RAB34Q9BZG1 259 aa23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 TTC12Q9H892 705 aaPredicted RBP23.07■■□□□ 1.28
VCPKMT-202ENST00000395860 IGLV3-22A0A075B6J6 115 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 FXR2P51116 673 aaKnown RBP eCLIP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 CEP55Q53EZ4 464 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 ANKRD13CQ8N6S4 541 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 IL31RAQ8NI17 732 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 HHIPL1Q96JK4 782 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 PDCD2LQ9BRP1 358 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 ZNFX1Q9P2E3 1918 aaKnown RBP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 FAM155AB1AL88 458 aaPredicted RBP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 POLR2DO15514 142 aaKnown RBP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 CCNA1P78396 465 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 PLA2G4DQ86XP0 818 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 PDILTQ8N807 584 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 ZNF784Q8NCA9 323 aaPredicted RBP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 ETNPPLQ8TBG4 499 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 NSUN6Q8TEA1 469 aaKnown RBP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 ZFP91Q96JP5 570 aaPredicted RBP23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 TIGD1Q96MW7 591 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 PANK2Q9BZ23 570 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 MROH8Q9H579 483 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 PCDHA12Q9UN75 941 aa23.06■■□□□ 1.28
VCPKMT-202ENST00000395860 MYCLP12524 364 aaPredicted RBP23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 CDC25AP30304 524 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 SETQ01105 290 aaPredicted RBP23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 IGSF22Q8N9C0 903 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 SHCBP1Q8NEM2 672 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 GJA10Q969M2 543 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 FAM20AQ96MK3 541 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 UIMC1Q96RL1 719 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 MXRA8Q9BRK3 442 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 SDF4Q9BRK5 362 aa23.05■■□□□ 1.28
VCPKMT-202ENST00000395860 PP2D1A8MPX8 630 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 CTAGE5O15320 804 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 MSH4O15457 936 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 UBA7P41226 1012 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 INHBEP58166 350 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 PDIA5Q14554 519 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 WDR78Q5VTH9 848 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 PAXIP1Q6ZW49 1069 aaPredicted RBP23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 ZCCHC17Q9NP64 241 aaKnown RBP23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 LRWD1Q9UFC0 647 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 IGF2BP3O00425 579 aaKnown RBP eCLIP23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 ZNF445P59923 1031 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 R3HDMLQ9H3Y0 253 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 MORF4L1Q9UBU8 362 aa23.04■■□□□ 1.28
VCPKMT-202ENST00000395860 PLXNB2O15031 1838 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 MEIS1O00470 390 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 CCND2P30279 289 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 MRPS9P82933 396 aaKnown RBP23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 SREBF2Q12772 1141 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 LONRF3Q496Y0 759 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 XRRA1Q6P2D8 792 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 KRBA2Q6ZNG9 492 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 CNNM3Q8NE01 707 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 DNERQ8NFT8 737 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 RASSF8Q8NHQ8 419 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 DHX58Q96C10 678 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 MMP19Q99542 508 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 PYM1Q9BRP8 204 aaKnown RBP23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 CCSER1Q9C0I3 900 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 UBIAD1Q9Y5Z9 338 aa23.03■■□□□ 1.28
VCPKMT-202ENST00000395860 A0A087X0B3 334 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 POTEMA6NI47 508 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 POTEB2H3BUK9 544 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 NR3C2P08235 984 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 GRM1Q13255 1194 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 KCTD2Q14681 263 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 NIPA1Q7RTP0 329 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 CABP7Q86V35 215 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 IFNL1Q8IU54 200 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 CKAP2LQ8IYA6 745 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 PORCNQ9H237 461 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 CCDC39Q9UFE4 941 aa23.02■■□□□ 1.28
VCPKMT-202ENST00000395860 ITGB5P18084 799 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 CNTN2Q02246 1040 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 TAF1CQ15572 869 aaPredicted RBP23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 EFCC1Q9HA90 598 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 SERTAD1Q9UHV2 236 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 KIAA1217Q5T5P2 1943 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 ARP10275 920 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 BCRP11274 1271 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 FCER1AP12319 257 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 GSE1Q14687 1217 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 KARSQ15046 597 aaKnown RBP23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 FAM110CQ1W6H9 321 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms