RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 KPNA6O60684 536 aa20.94■□□□□ 0.94
CXCL12-204ENST00000395793 FGBP02675 491 aa20.94■□□□□ 0.94
CXCL12-204ENST00000395793 NFRKBQ6P4R8 1299 aa20.94■□□□□ 0.94
CXCL12-204ENST00000395793 MAFAQ8NHW3 353 aaPredicted RBP20.94■□□□□ 0.94
CXCL12-204ENST00000395793 KAT2BQ92831 832 aa20.94■□□□□ 0.94
CXCL12-204ENST00000395793 TIFAQ96CG3 184 aa20.94■□□□□ 0.94
CXCL12-204ENST00000395793 UNC80Q8N2C7 3258 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 DOCK5Q9H7D0 1870 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 EIF3JO75822 258 aaKnown RBP20.93■□□□□ 0.94
CXCL12-204ENST00000395793 SUPT20HL2P0C7V6 817 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 CTAGE1Q96RT6 745 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 ESYT1Q9BSJ8 1104 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 MYL10Q9BUA6 226 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 ZNF576Q9H609 170 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 LY9Q9HBG7 655 aa20.93■□□□□ 0.94
CXCL12-204ENST00000395793 MYO9BQ13459 2157 aa20.92■□□□□ 0.94
CXCL12-204ENST00000395793 CUL9Q8IWT3 2517 aa20.92■□□□□ 0.94
CXCL12-204ENST00000395793 FOSL2P15408 326 aa20.92■□□□□ 0.94
CXCL12-204ENST00000395793 PGM5Q15124 567 aa20.92■□□□□ 0.94
CXCL12-204ENST00000395793 ZFP91Q96JP5 570 aaPredicted RBP20.92■□□□□ 0.94
CXCL12-204ENST00000395793 PTPRSQ13332 1948 aa20.92■□□□□ 0.94
CXCL12-204ENST00000395793 CHD9Q3L8U1 2897 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 PNMA6FA0A0J9YX94 578 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 RBAK-RBAKDNI3L0D1 243 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 MYCLP12524 364 aaPredicted RBP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 CHMP4BP1P59074 171 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 PTPN11Q06124 597 aaPredicted RBP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 ZNF654Q8IZM8 581 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 PIBF1Q8WXW3 757 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 EMID1Q96A84 441 aaPredicted RBP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 MAP3K20Q9NYL2 800 aaKnown RBP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 YBX2Q9Y2T7 364 aaKnown RBP20.91■□□□□ 0.94
CXCL12-204ENST00000395793 MRVI1Q9Y6F6 885 aa20.91■□□□□ 0.94
CXCL12-204ENST00000395793 SLC27A2O14975 620 aa20.9■□□□□ 0.94
CXCL12-204ENST00000395793 GDF6Q6KF10 455 aaPredicted RBP20.9■□□□□ 0.94
CXCL12-204ENST00000395793 DEFB128Q7Z7B8 93 aa20.9■□□□□ 0.94
CXCL12-204ENST00000395793 CATIPQ7Z7H3 387 aa20.9■□□□□ 0.94
CXCL12-204ENST00000395793 VSIG10LQ86VR7 867 aa20.9■□□□□ 0.94
CXCL12-204ENST00000395793 GPKOWQ92917 476 aaPredicted RBP eCLIP20.9■□□□□ 0.94
CXCL12-204ENST00000395793 A0A0C4DFX4 3053 aa20.9■□□□□ 0.94
CXCL12-204ENST00000395793 GCOM1H8Y6P7 765 aaPredicted RBP20.89■□□□□ 0.93
CXCL12-204ENST00000395793 SH2B2O14492 632 aaPredicted RBP20.89■□□□□ 0.93
CXCL12-204ENST00000395793 PRC1O43663 620 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 SORBS3O60504 671 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 POLR2MP0CAP2 368 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 ZNF286BP0CG31 522 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 SP2Q02086 613 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 SESTD1Q86VW0 696 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 FCHSD1Q86WN1 690 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 RPUSD2Q8IZ73 545 aaKnown RBP20.89■□□□□ 0.93
CXCL12-204ENST00000395793 SAMD3Q8N6K7 520 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 NKX2-4Q9H2Z4 354 aa20.89■□□□□ 0.93
CXCL12-204ENST00000395793 FRMPD4Q14CM0 1322 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 PITPNM1O00562 1244 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 DDAH1O94760 285 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 PLEKHA8P1O95397 391 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 HOXD8P13378 290 aaPredicted RBP20.88■□□□□ 0.93
CXCL12-204ENST00000395793 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
CXCL12-204ENST00000395793 RABGGTBP53611 331 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 NECTIN1Q15223 517 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 PTGISQ16647 500 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 USP38Q8NB14 1042 aa20.88■□□□□ 0.93
CXCL12-204ENST00000395793 DHX38Q92620 1227 aaKnown RBP20.88■□□□□ 0.93
CXCL12-204ENST00000395793 MTIF3Q9H2K0 278 aaKnown RBP20.88■□□□□ 0.93
CXCL12-204ENST00000395793 HAS3O00219 553 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 F2P00734 622 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 IQCF3P0C7M6 154 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 RXRAP19793 462 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 UBA1P22314 1058 aaKnown RBP20.87■□□□□ 0.93
CXCL12-204ENST00000395793 PSEN2P49810 448 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 LAMC2Q13753 1193 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 RAB30Q15771 203 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 DGKDQ16760 1214 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 MYSM1Q5VVJ2 828 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 DHX37Q8IY37 1157 aaKnown RBP20.87■□□□□ 0.93
CXCL12-204ENST00000395793 PPTC7Q8NI37 304 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 MAP3K14Q99558 947 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 SPZ1Q9BXG8 430 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 PRDM12Q9H4Q4 367 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 BCAS3Q9H6U6 928 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 HDAC6Q9UBN7 1215 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 PRUNE2Q8WUY3 3088 aa20.87■□□□□ 0.93
CXCL12-204ENST00000395793 ZBBXA8MT70 800 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 GGPS1O95749 300 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 PFKMP08237 780 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 MYOGP15173 224 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 CCND2P30279 289 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 MRPS9P82933 396 aaKnown RBP20.86■□□□□ 0.93
CXCL12-204ENST00000395793 HSDL1Q3SXM5 330 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 CELF3Q5SZQ8 465 aaKnown RBP20.86■□□□□ 0.93
CXCL12-204ENST00000395793 CASC1Q6TDU7 716 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 RAB11FIP4Q86YS3 637 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 ALG1Q9BT22 464 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 MTA3Q9BTC8 594 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 GTF2IRD1Q9UHL9 959 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 MSRAQ9UJ68 235 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 NOD1Q9Y239 953 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms