RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 MYL3P08590 195 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 CST5P28325 142 aaPredicted RBP8.83□□□□□ -1
HMGB3P1-201ENST00000393368 TLE2Q04725 743 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 TRAF1Q13077 416 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 SNX17Q15036 470 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 PWP2Q15269 919 aaKnown RBP8.83□□□□□ -1
HMGB3P1-201ENST00000393368 SH3RF1Q7Z6J0 888 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 FBXL16Q8N461 479 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 SCFD2Q8WU76 684 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 CUL5Q93034 780 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 VTI1AQ96AJ9 217 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 IWS1Q96ST2 819 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 TSEN34Q9BSV6 310 aaKnown RBP8.83□□□□□ -1
HMGB3P1-201ENST00000393368 SLC26A6Q9BXS9 759 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 BCAS3Q9H6U6 928 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 PSTPIP2Q9H939 334 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 TMEM260Q9NX78 707 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 RTEL1Q9NZ71 1219 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 COLQQ9Y215 455 aaPredicted RBP8.83□□□□□ -1
HMGB3P1-201ENST00000393368 MRVI1Q9Y6F6 885 aa8.83□□□□□ -1
HMGB3P1-201ENST00000393368 BAZ2BQ9UIF8 2168 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MOXD2PA6NHM9 499 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 B4DLN1 442 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 RBAK-RBAKDNI3L0D1 243 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 EIF3JO75822 258 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 LARGE1O95461 756 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 CCND2P30279 289 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MRPL12P52815 198 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 RCAN1P53805 252 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 AK2P54819 239 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 CHMP4BP1P59074 171 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MRPS9P82933 396 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MDM2Q00987 491 aaPredicted RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 ARHGAP1Q07960 439 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 TTLL4Q14679 1199 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 NTRK3Q16288 839 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 PKN1Q16512 942 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 CCDC62Q6P9F0 684 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 VSIG10LQ86VR7 867 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 PCSK9Q8NBP7 692 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 AFG1LQ8WV93 481 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 GLT1D1Q96MS3 346 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MAF1Q9H063 256 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 PDLIM7Q9NR12 457 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MAP3K20Q9NYL2 800 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 DDX41Q9UJV9 622 aaKnown RBP8.82□□□□□ -1
HMGB3P1-201ENST00000393368 TPCN1Q9ULQ1 816 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 TELO2Q9Y4R8 837 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 MYH6P13533 1939 aa8.82□□□□□ -1
HMGB3P1-201ENST00000393368 GRIN2DO15399 1336 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 FRMPD4Q14CM0 1322 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 CCDC196A0A1B0GTZ2 297 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 TRIM43BA6NCK2 446 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 SMCO2A6NFE2 343 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 PIK3CDO00329 1044 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 SCG2P13521 617 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 UBA1P22314 1058 aaKnown RBP8.81□□□□□ -1
HMGB3P1-201ENST00000393368 ITGB8P26012 769 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 MAGEA10P43363 369 aaPredicted RBP8.81□□□□□ -1
HMGB3P1-201ENST00000393368 ADCY7P51828 1080 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 EVCP57679 992 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 ANAPC15P60006 121 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 NKX3-2P78367 333 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 SP2Q02086 613 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 SCRN1Q12765 414 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 PFKFB3Q16875 520 aaPredicted RBP8.81□□□□□ -1
HMGB3P1-201ENST00000393368 NECAB1Q8N987 351 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 TRIM43Q96BQ3 446 aaPredicted RBP8.81□□□□□ -1
HMGB3P1-201ENST00000393368 AIFM3Q96NN9 605 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 RIC8AQ9NPQ8 531 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 BARHL2Q9NY43 387 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 PKD2L1Q9P0L9 805 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 VPS54Q9P1Q0 977 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 PCDHA6Q9UN73 950 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 PCDHA8Q9Y5H6 950 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 PDE4DIPQ5VU43 2346 aa8.81□□□□□ -1
HMGB3P1-201ENST00000393368 A0A0U1RQG5 324 aaPredicted RBP8.8□□□□□ -1
HMGB3P1-201ENST00000393368 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 PRPF3O43395 683 aaKnown RBP8.8□□□□□ -1
HMGB3P1-201ENST00000393368 GGPS1O95749 300 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 GH1P01241 217 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 MMP3P08254 477 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 CLTBP09497 229 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 IFNAR1P17181 557 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 CPT1AP50416 773 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 NEK4P51957 841 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 PURAQ00577 322 aaKnown RBP8.8□□□□□ -1
HMGB3P1-201ENST00000393368 SP4Q02446 784 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 FAAP100Q0VG06 881 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 SEMA3FQ13275 785 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 C1orf53Q5VUE5 145 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 JAKMIP3Q5VZ66 844 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 PCNX4Q63HM2 1172 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 RASGRP4Q8TDF6 673 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 ZNF274Q96GC6 653 aaPredicted RBP8.8□□□□□ -1
HMGB3P1-201ENST00000393368 UIMC1Q96RL1 719 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 TRPV6Q9H1D0 765 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms