RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 GTPBP4Q9BZE4 634 aaKnown RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 PARP14Q460N5 1801 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF500O60304 480 aaPredicted RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 PTGS1P23219 599 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF76P36508 570 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 HSD17B4P51659 736 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 GHRHRQ02643 423 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 SMYD4Q8IYR2 804 aaPredicted RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 LARP4BQ92615 738 aaKnown RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 RAD54LQ92698 747 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 GJA10Q969M2 543 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 ZNF830Q96NB3 372 aaPredicted RBP23.96■■□□□ 1.43
SPHK1-202ENST00000392496 LRRC27Q9C0I9 530 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 NT5C3AQ9H0P0 336 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 NRBP1Q9UHY1 535 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 STK24Q9Y6E0 443 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 ZHX2Q9Y6X8 837 aa23.96■■□□□ 1.43
SPHK1-202ENST00000392496 KLHL10Q6JEL2 608 aa23.95■■□□□ 1.42
SPHK1-202ENST00000392496 MCF2L2Q86YR7 1114 aa23.95■■□□□ 1.42
SPHK1-202ENST00000392496 SAMD3Q8N6K7 520 aa23.95■■□□□ 1.42
SPHK1-202ENST00000392496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.95■■□□□ 1.421e-6■■■□□ 18.2
SPHK1-202ENST00000392496 DCPSQ96C86 337 aaKnown RBP23.95■■□□□ 1.42
SPHK1-202ENST00000392496 FZD1Q9UP38 647 aa23.95■■□□□ 1.42
SPHK1-202ENST00000392496 ZBED4O75132 1171 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 SERPINC1P01008 464 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 UBASH3AP57075 661 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 KCNF1Q9H3M0 494 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 RTN4Q9NQC3 1192 aaKnown RBP23.94■■□□□ 1.42
SPHK1-202ENST00000392496 IMPACTQ9P2X3 320 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 RWDD2AQ9UIY3 292 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 RABGAP1Q9Y3P9 1069 aa23.94■■□□□ 1.42
SPHK1-202ENST00000392496 IGLV3-22A0A075B6J6 115 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 USP2O75604 605 aaPredicted RBP23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CCT6AP40227 531 aaKnown RBP23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CLEC4DQ8WXI8 215 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 MAP3K20Q9NYL2 800 aaKnown RBP23.93■■□□□ 1.42
SPHK1-202ENST00000392496 MSH4O15457 936 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 SPIRE1Q08AE8 756 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CCDC144BQ3MJ40 725 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CNNM4Q6P4Q7 775 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 GIMAP8Q8ND71 665 aaPredicted RBP23.93■■□□□ 1.42
SPHK1-202ENST00000392496 RAVER2Q9HCJ3 691 aaKnown RBP23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CTNND2Q9UQB3 1225 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 GDAQ9Y2T3 454 aa23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CTDP1Q9Y5B0 961 aaPredicted RBP23.93■■□□□ 1.42
SPHK1-202ENST00000392496 CDK11BP21127 795 aaKnown RBP23.92■■□□□ 1.42
SPHK1-202ENST00000392496 ASIC1P78348 528 aa23.92■■□□□ 1.42
SPHK1-202ENST00000392496 PAK1Q13153 545 aa23.92■■□□□ 1.42
SPHK1-202ENST00000392496 MCM6Q14566 821 aa23.92■■□□□ 1.42
SPHK1-202ENST00000392496 HAUS3Q68CZ6 603 aa23.92■■□□□ 1.42
SPHK1-202ENST00000392496 PNMA8AQ86V59 439 aaPredicted RBP23.92■■□□□ 1.42
SPHK1-202ENST00000392496 SULF1Q8IWU6 871 aa23.92■■□□□ 1.42
SPHK1-202ENST00000392496 ADSSL1Q8N142 457 aa23.92■■□□□ 1.42
SPHK1-202ENST00000392496 SAMSN1Q9NSI8 373 aaKnown RBP23.92■■□□□ 1.42
SPHK1-202ENST00000392496 RBBP6Q7Z6E9 1792 aaKnown RBP23.92■■□□□ 1.42
SPHK1-202ENST00000392496 PRCPP42785 496 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 STX17P56962 302 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 ECM1Q16610 540 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 CPXCR1Q8N123 301 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 ERMNQ8TAM6 284 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 EXOC1Q9NV70 894 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 AFG3L2Q9Y4W6 797 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 PVALEFA0A1B0GWK0 134 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 ALAS1P13196 640 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 HMGCS2P54868 508 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 STIM1Q13586 685 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 KCNK18Q7Z418 384 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 CYP2W1Q8TAV3 490 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 NELFBQ8WX92 580 aa23.91■■□□□ 1.42
SPHK1-202ENST00000392496 RLFQ13129 1914 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 MYMKA6NI61 221 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 VWA5AO00534 786 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 NFIBO00712 420 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 HOXA7P31268 230 aaPredicted RBP23.9■■□□□ 1.42
SPHK1-202ENST00000392496 PPP1R2P41236 205 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 GSDMDP57764 484 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 MAP3K9P80192 1104 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 PDE4DQ08499 809 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 DHX8Q14562 1220 aaKnown RBP23.9■■□□□ 1.42
SPHK1-202ENST00000392496 CDKAL1Q5VV42 579 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 TMOD4Q9NZQ9 345 aa23.9■■□□□ 1.42
SPHK1-202ENST00000392496 RPTORQ8N122 1335 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 PAPPA2Q9BXP8 1791 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 SCN4AP35499 1836 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 EPHX2P34913 555 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 STAT3P40763 770 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 CEP55Q53EZ4 464 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 SH3D19Q5HYK7 790 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 USP50Q70EL3 339 aaPredicted RBP23.89■■□□□ 1.42
SPHK1-202ENST00000392496 UNC13DQ70J99 1090 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 ZNF526Q8TF50 670 aaPredicted RBP23.89■■□□□ 1.42
SPHK1-202ENST00000392496 ATG4CQ96DT6 458 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 UIMC1Q96RL1 719 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 GPBP1L1Q9HC44 474 aaPredicted RBP23.89■■□□□ 1.42
SPHK1-202ENST00000392496 VAV3Q9UKW4 847 aa23.89■■□□□ 1.42
SPHK1-202ENST00000392496 YY1P25490 414 aa23.88■■□□□ 1.41
SPHK1-202ENST00000392496 DSG3P32926 999 aa23.88■■□□□ 1.41
SPHK1-202ENST00000392496 SETQ01105 290 aaPredicted RBP23.88■■□□□ 1.41
SPHK1-202ENST00000392496 COBLL1Q53SF7 1204 aa23.88■■□□□ 1.41
SPHK1-202ENST00000392496 FILIP1Q7Z7B0 1213 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms