RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 XIRP2A4UGR9 3374 aa10.5□□□□□ -0.73
TRAV20-201ENST00000390448 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
TRAV20-201ENST00000390448 BAIAP3O94812 1187 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 MMP3P08254 477 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 LAMC2Q13753 1193 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 IFIT1BQ5T764 474 aaKnown RBP10.49□□□□□ -0.73
TRAV20-201ENST00000390448 CCDC62Q6P9F0 684 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 DHX37Q8IY37 1157 aaKnown RBP10.49□□□□□ -0.73
TRAV20-201ENST00000390448 ALG1Q9BT22 464 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 KATNAL1Q9BW62 490 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 AMNQ9BXJ7 453 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 ZSWIM5Q9P217 1185 aa10.49□□□□□ -0.73
TRAV20-201ENST00000390448 TRANK1O15050 2925 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 PARNO95453 639 aaKnown RBP10.48□□□□□ -0.73
TRAV20-201ENST00000390448 NR3C2P08235 984 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
TRAV20-201ENST00000390448 SELPP16109 830 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 COL9A1P20849 921 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 TFF2Q03403 129 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 TRDNQ13061 729 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 GDF6Q6KF10 455 aaPredicted RBP10.48□□□□□ -0.73
TRAV20-201ENST00000390448 LRRC8DQ7L1W4 858 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 PLEKHM2Q8IWE5 1019 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
TRAV20-201ENST00000390448 VWCEQ96DN2 955 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 JMJD4Q9H9V9 463 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 MTCH2Q9Y6C9 303 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 NCOR1O75376 2440 aa10.48□□□□□ -0.73
TRAV20-201ENST00000390448 LRRC37A2A6NM11 1700 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 ERICH2A1L162 156 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 KLRF2D3W0D1 207 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 SORBS3O60504 671 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 PSEN2P49810 448 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 NUCB1Q02818 461 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 TAP1Q03518 808 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 ARHGAP1Q07960 439 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 TRAF1Q13077 416 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 IKBKEQ14164 716 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 MFSD10Q14728 455 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 KIAA0753Q2KHM9 967 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 KCNV1Q6PIU1 500 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 SMC5Q8IY18 1101 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 ANKS1AQ92625 1134 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
TRAV20-201ENST00000390448 DSCC1Q9BVC3 393 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 PXMP2Q9NR77 195 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 HDAC6Q9UBN7 1215 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
TRAV20-201ENST00000390448 COG5Q9UP83 839 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
TRAV20-201ENST00000390448 EFCAB14O75071 495 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 PPFIA4O75335 1185 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 ZNF286BP0CG31 522 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 CKBP12277 381 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 KCNQ1P51787 676 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 WDR5P61964 334 aaKnown RBP10.46□□□□□ -0.73
TRAV20-201ENST00000390448 FAM117BQ6P1L5 589 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 CNKSR3Q6P9H4 555 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 SESTD1Q86VW0 696 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 HOMER1Q86YM7 354 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 PPTC7Q8NI37 304 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 KAT2BQ92831 832 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 HLA-CQ95604 372 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 SPATA33Q96N06 139 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 NECAB3Q96P71 396 aaPredicted RBP10.46□□□□□ -0.73
TRAV20-201ENST00000390448 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 GTF2IRD1Q9UHL9 959 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 MTUS1Q9ULD2 1270 aa10.46□□□□□ -0.73
TRAV20-201ENST00000390448 REV3LO60673 3130 aa10.46□□□□□ -0.74
TRAV20-201ENST00000390448 LCTP09848 1927 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 ABHD14A-ACY1A0A1B0GW23 586 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 NOP56O00567 594 aaKnown RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 ZBTB5O15062 677 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 POLR2MP0CAP2 368 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 BMP1P13497 986 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 POU3F3P20264 500 aaPredicted RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 HOXA13P31271 388 aaPredicted RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 PTK7Q13308 1070 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 GRB10Q13322 594 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 KRT40Q6A162 431 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 TMCO2Q7Z6W1 182 aaPredicted RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 RAD9AQ99638 391 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 C1QTNF1Q9BXJ1 281 aa10.45□□□□□ -0.74
TRAV20-201ENST00000390448 MAP3K20Q9NYL2 800 aaKnown RBP10.45□□□□□ -0.74
TRAV20-201ENST00000390448 PRRC2BQ5JSZ5 2229 aaKnown RBP10.44□□□□□ -0.74
TRAV20-201ENST00000390448 EPOPA6NHQ4 379 aa10.44□□□□□ -0.74
TRAV20-201ENST00000390448 IFIT3O14879 490 aaKnown RBP10.44□□□□□ -0.74
TRAV20-201ENST00000390448 GGPS1O95749 300 aa10.44□□□□□ -0.74
TRAV20-201ENST00000390448 IGHDP01880 384 aa10.44□□□□□ -0.74
TRAV20-201ENST00000390448 CCND2P30279 289 aa10.44□□□□□ -0.74
TRAV20-201ENST00000390448 THPOP40225 353 aa10.44□□□□□ -0.74
TRAV20-201ENST00000390448 HSD17B4P51659 736 aa10.44□□□□□ -0.74
TRAV20-201ENST00000390448 SART3Q15020 963 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms