RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 SPP2Q13103 211 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 CCDC174Q6PII3 467 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 LRRC8AQ8IWT6 810 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 CCDC150Q8NCX0 1101 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 ANKRD20A12PQ8NF67 263 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 STAMQ92783 540 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 LENG9Q96B70 501 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 DCPSQ96C86 337 aaKnown RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 BLOC1S4Q9NUP1 217 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 CCPG1Q9ULG6 757 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 ADAMTS5Q9UNA0 930 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 CTDP1Q9Y5B0 961 aaPredicted RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 POTEMA6NI47 508 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 ATP2A1O14983 1001 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 MTMR2Q13614 643 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 FILIP1LQ4L180 1135 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 PRR16Q569H4 304 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 CDKAL1Q5VV42 579 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 XRRA1Q6P2D8 792 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 P2RX7Q99572 595 aaKnown RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 POLR3CQ9BUI4 534 aaPredicted RBP15.2■□□□□ 0.02
SEC13-203ENST00000383801 EXOC1Q9NV70 894 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
SEC13-203ENST00000383801 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
SEC13-203ENST00000383801 FLOT1O75955 427 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 PTGS1P23219 599 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 CASP1P29466 404 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 CCT6AP40227 531 aaKnown RBP15.19■□□□□ 0.02
SEC13-203ENST00000383801 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 SPIRE1Q08AE8 756 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 COG2Q14746 738 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 TKFCQ3LXA3 575 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.19■□□□□ 0.022e-11■□□□□ 8.9
SEC13-203ENST00000383801 KIAA1524Q8TCG1 905 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 MED15Q96RN5 788 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 WDR11Q9BZH6 1224 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
SEC13-203ENST00000383801 FBXO28Q9NVF7 368 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 HOXC10Q9NYD6 342 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 TMOD4Q9NZQ9 345 aa15.19■□□□□ 0.02
SEC13-203ENST00000383801 RPTORQ8N122 1335 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 A0A1B0GTH6 734 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 MEIS1O00470 390 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 MSH4O15457 936 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
SEC13-203ENST00000383801 ATP1A3P13637 1013 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 HOXA13P31271 388 aaPredicted RBP15.18■□□□□ 0.02
SEC13-203ENST00000383801 DSG3P32926 999 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 PRCPP42785 496 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 KCNJ6P48051 423 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 ASIC1P78348 528 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 PDE4DQ08499 809 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 NR1I3Q14994 352 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 FCHSD1Q86WN1 690 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 VSTM4Q8IW00 320 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 SULF1Q8IWU6 871 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 NELFBQ8WX92 580 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.18■□□□□ 0.02
SEC13-203ENST00000383801 AFG3L2Q9Y4W6 797 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 ZHX2Q9Y6X8 837 aa15.18■□□□□ 0.02
SEC13-203ENST00000383801 FRMPD4Q14CM0 1322 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 VWA5AO00534 786 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
SEC13-203ENST00000383801 KIF20AO95235 890 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 CCNE1P24864 410 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 PPP2R5CQ13362 524 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 LRRC15Q8TF66 581 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 CLEC4DQ8WXI8 215 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 SLC5A5Q92911 643 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 PLIN2Q99541 437 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 RIT2Q99578 217 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 THAP9Q9H5L6 903 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 TUFT1Q9NNX1 390 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 SPTLC3Q9NUV7 552 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 LIMA1Q9UHB6 759 aaKnown RBP15.17■□□□□ 0.02
SEC13-203ENST00000383801 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
SEC13-203ENST00000383801 MAFGO15525 162 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 FGFR1OPO95684 399 aaKnown RBP15.16■□□□□ 0.02
SEC13-203ENST00000383801 EEF1GP26641 437 aaKnown RBP15.16■□□□□ 0.02
SEC13-203ENST00000383801 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■■■ 27.8
SEC13-203ENST00000383801 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 PCNX4Q63HM2 1172 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 KLHL10Q6JEL2 608 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 OTOP1Q7RTM1 612 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
SEC13-203ENST00000383801 FAM114A1Q8IWE2 563 aa15.16■□□□□ 0.02
SEC13-203ENST00000383801 GUF1Q8N442 669 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms