RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 NLRP5P59047 1200 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 XRRA1Q6P2D8 792 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 CCDC62Q6P9F0 684 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 REXO1Q8N1G1 1221 aaKnown RBP22.87■■□□□ 1.25
CDPF1-202ENST00000381037 DAGLBQ8NCG7 672 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 BICD2Q8TD16 824 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 PCDHA4Q9UN74 947 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 KCNJ14Q9UNX9 436 aa22.87■■□□□ 1.25
CDPF1-202ENST00000381037 DUSP11O75319 330 aaKnown RBP22.86■■□□□ 1.25
CDPF1-202ENST00000381037 RARBP10826 455 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 TNFAIP2Q03169 654 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 JAKMIP3Q5VZ66 844 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 GALNT17Q6IS24 598 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 ZFP91Q96JP5 570 aaPredicted RBP22.86■■□□□ 1.25
CDPF1-202ENST00000381037 PGBD1Q96JS3 809 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 INPP4AQ96PE3 977 aaPredicted RBP22.86■■□□□ 1.25
CDPF1-202ENST00000381037 ANO3Q9BYT9 981 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 ADAMTS4O75173 837 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 TFRCP02786 760 aaKnown RBP22.86■■□□□ 1.25
CDPF1-202ENST00000381037 SREBF1P36956 1147 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 NKX3-2P78367 333 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 HMGN5P82970 282 aaKnown RBP22.86■■□□□ 1.25
CDPF1-202ENST00000381037 DUSP28Q4G0W2 176 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 MCTP2Q6DN12 878 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 UBE2Q1Q7Z7E8 422 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 RASGRP4Q8TDF6 673 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 SCFD2Q8WU76 684 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 WDR11Q9BZH6 1224 aa22.86■■□□□ 1.25
CDPF1-202ENST00000381037 STAM2O75886 525 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 ARIH2O95376 493 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 PTGS1P23219 599 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 CUL4AQ13619 759 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 BLIDQ8IZY5 108 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 SNX21Q969T3 373 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 FRMPD3Q5JV73 1810 aa22.85■■□□□ 1.25
CDPF1-202ENST00000381037 CTAGE5O15320 804 aa22.84■■□□□ 1.25
CDPF1-202ENST00000381037 XBP1P17861 261 aa22.84■■□□□ 1.25
CDPF1-202ENST00000381037 SEPT14Q6ZU15 432 aa22.84■■□□□ 1.25
CDPF1-202ENST00000381037 ANKLE1Q8NAG6 615 aa22.84■■□□□ 1.25
CDPF1-202ENST00000381037 UPF3AQ9H1J1 476 aaKnown RBP22.84■■□□□ 1.25
CDPF1-202ENST00000381037 XPNPEP3Q9NQH7 507 aa22.84■■□□□ 1.25
CDPF1-202ENST00000381037 EDIL3O43854 480 aa22.83■■□□□ 1.25
CDPF1-202ENST00000381037 GJA9P57773 515 aa22.83■■□□□ 1.25
CDPF1-202ENST00000381037 GJC2Q5T442 439 aaPredicted RBP22.83■■□□□ 1.25
CDPF1-202ENST00000381037 DDX41Q9UJV9 622 aaKnown RBP22.83■■□□□ 1.25
CDPF1-202ENST00000381037 Q9Y3F1 56 aa22.83■■□□□ 1.25
CDPF1-202ENST00000381037 SYNRGQ9UMZ2 1314 aa22.83■■□□□ 1.25
CDPF1-202ENST00000381037 PGK1P00558 417 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 ICAM3P32942 547 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 RGS19P49795 217 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 IRX5P78411 483 aaPredicted RBP22.82■■□□□ 1.24
CDPF1-202ENST00000381037 TTLL4Q14679 1199 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 KLHDC9Q8NEP7 349 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 EHMT1Q9H9B1 1298 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 RTEL1Q9NZ71 1219 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 UBIAD1Q9Y5Z9 338 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 KIAA1217Q5T5P2 1943 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 CAPN15O75808 1086 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 TXNP10599 105 aaKnown RBP22.82■■□□□ 1.24
CDPF1-202ENST00000381037 TGFB3P10600 412 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 ITGB5P18084 799 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 SEMA3FQ13275 785 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 LRRC41Q15345 812 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 CCSAPQ6IQ19 270 aaPredicted RBP22.82■■□□□ 1.24
CDPF1-202ENST00000381037 OXER1Q8TDS5 423 aa22.82■■□□□ 1.24
CDPF1-202ENST00000381037 SPATA31C2B4DYI2 1134 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 CYP3A4P08684 503 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 ARHGAP4P98171 946 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 SP2Q02086 613 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 KRT40Q6A162 431 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 ARRDC4Q8NCT1 418 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 DNAH12Q6ZR08 3092 aa22.81■■□□□ 1.24
CDPF1-202ENST00000381037 MYADML2A6NDP7 307 aa22.8■■□□□ 1.24
CDPF1-202ENST00000381037 DNM1LO00429 736 aa22.8■■□□□ 1.24
CDPF1-202ENST00000381037 NKRFO15226 690 aaKnown RBP eCLIP22.8■■□□□ 1.24
CDPF1-202ENST00000381037 MMP1P03956 469 aa22.8■■□□□ 1.24
CDPF1-202ENST00000381037 CST5P28325 142 aaPredicted RBP22.8■■□□□ 1.24
CDPF1-202ENST00000381037 LY6KQ17RY6 165 aa22.8■■□□□ 1.24
CDPF1-202ENST00000381037 COPS5Q92905 334 aa22.8■■□□□ 1.24
CDPF1-202ENST00000381037 MRVI1Q9Y6F6 885 aa22.8■■□□□ 1.24
CDPF1-202ENST00000381037 K7ELQ4 463 aaPredicted RBP22.79■■□□□ 1.24
CDPF1-202ENST00000381037 DYNC1LI2O43237 492 aaPredicted RBP22.79■■□□□ 1.24
CDPF1-202ENST00000381037 COL6A1P12109 1028 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 GNPTABQ3T906 1256 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 KCNV1Q6PIU1 500 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 TLK2Q86UE8 772 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 FBXO18Q8NFZ0 1043 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 CYP2W1Q8TAV3 490 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 DIS3LQ8TF46 1054 aaKnown RBP22.79■■□□□ 1.24
CDPF1-202ENST00000381037 TNFRSF25Q93038 417 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 GPRASP2Q96D09 838 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 MEIS1O00470 390 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 FIBPO43427 364 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 ARHGAP1Q07960 439 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 CEP55Q53EZ4 464 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 RNF180Q86T96 592 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 PAWRQ96IZ0 340 aaKnown RBP22.79■■□□□ 1.24
CDPF1-202ENST00000381037 MXRA8Q9BRK3 442 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 JADE2Q9NQC1 790 aa22.79■■□□□ 1.24
CDPF1-202ENST00000381037 FAM86B1E9PN63 330 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms