RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 ALS2CR12Q96Q35 445 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 SH2D4AQ9H788 454 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 MARCH6O60337 910 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 LCA5LO95447 670 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 TNNI2P48788 182 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 AARSP49588 968 aaKnown RBP eCLIP18.11■□□□□ 0.49
VPS16-203ENST00000380469 PRR5LQ6MZQ0 368 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 PPP1R18Q6NYC8 613 aa18.11■□□□□ 0.49
VPS16-203ENST00000380469 A0A0U1RQG5 324 aaPredicted RBP18.1■□□□□ 0.49
VPS16-203ENST00000380469 PDE2AO00408 941 aaPredicted RBP18.1■□□□□ 0.49
VPS16-203ENST00000380469 PRLRP16471 622 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 LRRC47Q8N1G4 583 aaKnown RBP18.1■□□□□ 0.49
VPS16-203ENST00000380469 COG1Q8WTW3 980 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 TANGO6Q9C0B7 1094 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 PLIN4Q96Q06 1357 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 PNMA6FA0A0J9YX94 578 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 EPHB6O15197 1021 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 SEPT2Q15019 361 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 TMEM119Q4V9L6 283 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 PPP4R3AQ6IN85 833 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 FOXR2Q6PJQ5 311 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 CCNI2Q6ZMN8 369 aaPredicted RBP18.1■□□□□ 0.49
VPS16-203ENST00000380469 FAM196AQ6ZSG2 479 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 CACNA2D4Q7Z3S7 1137 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 PROM2Q8N271 834 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 SMCR8Q8TEV9 937 aaPredicted RBP18.1■□□□□ 0.49
VPS16-203ENST00000380469 EDEM3Q9BZQ6 932 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 HPCAL4Q9UM19 191 aa18.1■□□□□ 0.49
VPS16-203ENST00000380469 LRRC53A6NM62 1247 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 ZMYND10O75800 440 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 MOCS3O95396 460 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 MAGEA1P43355 309 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 C2orf54Q08AI8 447 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 PICALMQ13492 652 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 MYOCDQ8IZQ8 938 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 CRACR2AQ9BSW2 395 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 MLXIPQ9HAP2 919 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
VPS16-203ENST00000380469 DDX25Q9UHL0 483 aaKnown RBP18.09■□□□□ 0.49
VPS16-203ENST00000380469 BBOX1O75936 387 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 IVLP07476 585 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 EIF6P56537 245 aaKnown RBP18.09■□□□□ 0.49
VPS16-203ENST00000380469 LRRC41Q15345 812 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 DPP8Q6V1X1 898 aaPredicted RBP18.09■□□□□ 0.49
VPS16-203ENST00000380469 LRRC55Q6ZSA7 311 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 CREG2Q8IUH2 290 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 MMGT1Q8N4V1 131 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 CUL5Q93034 780 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 NUDT12Q9BQG2 462 aa18.09■□□□□ 0.49
VPS16-203ENST00000380469 TULP2O00295 520 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 EDIL3O43854 480 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 RNF40O75150 1001 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 TTLL1O95922 423 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 AKR1B1P15121 316 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 MRPL12P52815 198 aaKnown RBP18.08■□□□□ 0.48
VPS16-203ENST00000380469 CRY2Q49AN0 593 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 ADGRF4Q8IZF3 695 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 DRC1Q96MC2 740 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 FAM204AQ9H8W3 233 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 JMJD4Q9H9V9 463 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 DAGLAQ9Y4D2 1042 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 CAPN6Q9Y6Q1 641 aa18.08■□□□□ 0.48
VPS16-203ENST00000380469 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 TCP1P17987 556 aaKnown RBP18.07■□□□□ 0.48
VPS16-203ENST00000380469 ITIH3Q06033 890 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 EHHADHQ08426 723 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 UBE2SQ16763 222 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 PDXDC1Q6P996 788 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 ARHGAP27Q6ZUM4 889 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 KCNK18Q7Z418 384 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 TBC1D16Q8TBP0 767 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 POLLQ9UGP5 575 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 HYOU1Q9Y4L1 999 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 SYF2O95926 243 aaKnown RBP18.07■□□□□ 0.48
VPS16-203ENST00000380469 FKBP3Q00688 224 aaKnown RBP18.07■□□□□ 0.48
VPS16-203ENST00000380469 ZNF543Q08ER8 600 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 CCDC40Q4G0X9 1142 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 FAM182BQ5T319 152 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 ZNF572Q7Z3I7 529 aaPredicted RBP18.07■□□□□ 0.48
VPS16-203ENST00000380469 BAP1Q92560 729 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 RUBCNQ92622 972 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 NUCKS1Q9H1E3 243 aaKnown RBP18.07■□□□□ 0.48
VPS16-203ENST00000380469 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 PANK4Q9NVE7 773 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 PODXL2Q9NZ53 605 aa18.07■□□□□ 0.48
VPS16-203ENST00000380469 IGKV6D-41A0A0C4DH26 115 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 TRAF5O00463 557 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 PJA2O43164 708 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 GABPAQ06546 454 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 COASYQ13057 564 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 CCDC181Q5TID7 509 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 AFAP1L1Q8TED9 768 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 OSBPL9Q96SU4 736 aa18.06■□□□□ 0.48
VPS16-203ENST00000380469 SELENOOQ9BVL4 669 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms