RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 IL31RAQ8NI17 732 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
PDPN-203ENST00000376061 HHIPL1Q96JK4 782 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 PARK7Q99497 189 aaKnown RBP11.86□□□□□ -0.51
PDPN-203ENST00000376061 MAF1Q9H063 256 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 CSRNP2Q9H175 543 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
PDPN-203ENST00000376061 PLXNA1Q9UIW2 1896 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 KIAA1217Q5T5P2 1943 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 ZNFX1Q9P2E3 1918 aaKnown RBP11.85□□□□□ -0.51
PDPN-203ENST00000376061 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 FAM86B1E9PN63 330 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 IGF2BP3O00425 579 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDPN-203ENST00000376061 FAM86B2P0C5J1 330 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 COPB2P35606 906 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 NDUFA8P51970 172 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 ERVK-24P63145 666 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 UBXN2AP68543 259 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 CALCRLQ16602 461 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 SPECC1Q5M775 1068 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDPN-203ENST00000376061 FMR1NBQ8N0W7 255 aaPredicted RBP11.85□□□□□ -0.51
PDPN-203ENST00000376061 ENGASEQ8NFI3 743 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 LENG9Q96B70 501 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 MTMR9Q96QG7 549 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 ZCCHC17Q9NP64 241 aaKnown RBP11.85□□□□□ -0.51
PDPN-203ENST00000376061 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 HPSEQ9Y251 543 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 PFASO15067 1338 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 ADGRA2Q96PE1 1338 aa11.85□□□□□ -0.51
PDPN-203ENST00000376061 IGLV3-22A0A075B6J6 115 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 SLC25A27O95847 323 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 ERCC3P19447 782 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 SNW1Q13573 536 aaKnown RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 Q4G0T1 1027 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 PRR16Q569H4 304 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 CCDC183Q5T5S1 534 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 DTHD1Q6ZMT9 781 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 USP49Q70CQ1 688 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 NCAPG2Q86XI2 1143 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 ETNPPLQ8TBG4 499 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 SYAP1Q96A49 352 aaPredicted RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 TAAR1Q96RJ0 339 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 R3HDMLQ9H3Y0 253 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 PXMP2Q9NR77 195 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
PDPN-203ENST00000376061 MORF4L1Q9UBU8 362 aa11.84□□□□□ -0.51
PDPN-203ENST00000376061 Q3C1V9 767 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 CYP2W1Q8TAV3 490 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 SYMPKQ92797 1274 aaKnown RBP11.83□□□□□ -0.52
PDPN-203ENST00000376061 HAS1Q92839 578 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 RMDN3Q96TC7 470 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 PDCD2LQ9BRP1 358 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 CLSTN2Q9H4D0 955 aa11.83□□□□□ -0.52
PDPN-203ENST00000376061 PP2D1A8MPX8 630 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 ASTN1O14525 1302 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 MCM3APO60318 1980 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
PDPN-203ENST00000376061 ZNF76P36508 570 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 TXKP42681 527 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 SYKP43405 635 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 MRPS9P82933 396 aaKnown RBP11.82□□□□□ -0.52
PDPN-203ENST00000376061 PGM5Q15124 567 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 CEP55Q53EZ4 464 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 GJA10Q969M2 543 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 EPSTI1Q96J88 318 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 THSD7BQ9C0I4 1608 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 PORCNQ9H237 461 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 MROH8Q9H579 483 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 FAM13BQ9NYF5 915 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 KCNH3Q9ULD8 1083 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
PDPN-203ENST00000376061 A0A087X0B3 334 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 TBX3O15119 743 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 MSH4O15457 936 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 ITGB5P18084 799 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 TECP42680 631 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
PDPN-203ENST00000376061 CCNA1P78396 465 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 SETQ01105 290 aaPredicted RBP11.81□□□□□ -0.52
PDPN-203ENST00000376061 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms