RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CCDC70Q6NSX1 233 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 COA1Q9GZY4 146 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 FAM205AQ6ZU69 1335 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 C21orf2O43822 256 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 SCP2P22307 547 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 NAP1L1P55209 391 aaKnown RBP14.33□□□□□ -0.12
MSH5-204ENST00000375755 IQCEQ6IPM2 695 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.124e-8■■■■□ 19.5
MSH5-204ENST00000375755 RNF26Q9BY78 433 aaPredicted RBP14.33□□□□□ -0.12
MSH5-204ENST00000375755 CAPN11Q9UMQ6 739 aa14.33□□□□□ -0.12
MSH5-204ENST00000375755 GAKO14976 1311 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 CHUKO15111 745 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 PCP11498 1178 aaKnown RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
MSH5-204ENST00000375755 NPY5RQ15761 445 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 NAA35Q5VZE5 725 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 ALS2CLQ60I27 953 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 ZNF444Q8N0Y2 327 aaPredicted RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 GIMAP7Q8NHV1 300 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 ZIM3Q96PE6 472 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 MTRQ99707 1265 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 MCM8Q9UJA3 840 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 PRPF3O43395 683 aaKnown RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 HSF2BPO75031 334 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 EPHB4P54760 987 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 GUCY1A3Q02108 690 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 CYP27A1Q02318 531 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 NNTQ13423 1086 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
MSH5-204ENST00000375755 SMARCAL1Q9NZC9 954 aa14.32□□□□□ -0.12
MSH5-204ENST00000375755 G3V3G9 751 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 DDAH1O94760 285 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 KRT14P02533 472 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 LSP1P33241 339 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 NFIAQ12857 509 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 MEA1Q16626 185 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
MSH5-204ENST00000375755 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 SPATS2Q86XZ4 545 aaKnown RBP14.31□□□□□ -0.12
MSH5-204ENST00000375755 KIAA0825Q8IV33 1275 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 SPATA4Q8NEY3 305 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 TMEM47Q9BQJ4 181 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 SNX12Q9UMY4 172 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 GDAQ9Y2T3 454 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 LGALS16A8MUM7 142 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 EIF6P56537 245 aaKnown RBP14.31□□□□□ -0.12
MSH5-204ENST00000375755 NEDD9Q14511 834 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 RNF187Q5TA31 235 aaPredicted RBP14.31□□□□□ -0.12
MSH5-204ENST00000375755 FLAD1Q8NFF5 587 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 ZNF507Q8TCN5 953 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 EYA3Q99504 573 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 PHF20Q9BVI0 1012 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 KLC4Q9NSK0 619 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 AGPAT5Q9NUQ2 364 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 ROBO3Q96MS0 1386 aa14.31□□□□□ -0.12
MSH5-204ENST00000375755 H0YIN7 160 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 ELF1P32519 619 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 RCAN1P53805 252 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 APBA1Q02410 837 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 SHROOM1Q2M3G4 852 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 PREPLQ4J6C6 727 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 ZNF473Q8WTR7 871 aaKnown RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 TBC1D22AQ8WUA7 517 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 EPN3Q9H201 632 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 EHD2Q9NZN4 543 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 A6NNZ2 444 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 CYTH3O43739 400 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 RDXP35241 583 aaKnown RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 CYLC1P35663 651 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 PRCPP42785 496 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 AOC3Q16853 763 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 TUBB8Q3ZCM7 444 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 HAUS3Q68CZ6 603 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 EMBQ6PCB8 327 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 VCPKMTQ9H867 229 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 USP40Q9NVE5 1235 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 FAM196BA6NMK8 535 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 SEC24CP53992 1094 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 ACTN3Q08043 901 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 ZNF174Q15697 407 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 C16orf86Q6ZW13 317 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 ZNF572Q7Z3I7 529 aaPredicted RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 TMC4Q7Z404 712 aa14.3□□□□□ -0.12
MSH5-204ENST00000375755 YTHDF3Q7Z739 585 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms