RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 LIMA1Q9UHB6 759 aaKnown RBP18.4■□□□□ 0.54
VARS-215ENST00000375663 FEZ2Q9UHY8 353 aaPredicted RBP18.4■□□□□ 0.54
VARS-215ENST00000375663 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
VARS-215ENST00000375663 KRT15P19012 456 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 VPS41P49754 854 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 DHX9Q08211 1270 aaKnown RBP18.4■□□□□ 0.54
VARS-215ENST00000375663 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
VARS-215ENST00000375663 A0A1W2PQC6 194 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 GAS7O60861 476 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 CEP128Q6ZU80 1094 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 FAM114A2Q9NRY5 505 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 24.9
VARS-215ENST00000375663 STK38LQ9Y2H1 464 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 DAAM1Q9Y4D1 1078 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 DIXDC1Q155Q3 683 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 INTS9Q9NV88 658 aaKnown RBP18.39■□□□□ 0.53
VARS-215ENST00000375663 FHOD1Q9Y613 1164 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
VARS-215ENST00000375663 PAF1Q8N7H5 531 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 MAGOHBQ96A72 148 aaKnown RBP18.39■□□□□ 0.53
VARS-215ENST00000375663 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
VARS-215ENST00000375663 BACH1O14867 736 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 AFPP02771 609 aaKnown RBP18.38■□□□□ 0.53
VARS-215ENST00000375663 LIN9Q5TKA1 542 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 NFRKBQ6P4R8 1299 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 CCDC63Q8NA47 563 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 PPFIBP2Q8ND30 876 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 TACO1Q9BSH4 297 aaKnown RBP18.38■□□□□ 0.53
VARS-215ENST00000375663 SH3GLB2Q9NR46 395 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 USTQ9Y2C2 406 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 DEPDC5O75140 1603 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 LRRC53A6NM62 1247 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 CTNND1O60716 968 aaKnown RBP18.38■□□□□ 0.53
VARS-215ENST00000375663 FERP16591 822 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 PSMD2Q13200 908 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 ICE2Q659A1 982 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 SRLQ86TD4 932 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 PPLO60437 1756 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 PTPAQ15257 358 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 ASPRV1Q53RT3 343 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 RBM26Q5T8P6 1007 aaKnown RBP18.38■□□□□ 0.53
VARS-215ENST00000375663 PBKQ96KB5 322 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 OSBPL9Q96SU4 736 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 MMS19Q96T76 1030 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 CAPN11Q9UMQ6 739 aa18.38■□□□□ 0.53
VARS-215ENST00000375663 PLTPP55058 493 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 SNCBQ16143 134 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 GLE1Q53GS7 698 aaKnown RBP18.37■□□□□ 0.53
VARS-215ENST00000375663 HHATQ5VTY9 493 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 CCDC197Q8NCU1 140 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 CPVLQ9H3G5 476 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 NOVA2Q9UNW9 492 aaKnown RBP18.37■□□□□ 0.53
VARS-215ENST00000375663 EXOC7Q9UPT5 735 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 TXNRD1Q16881 649 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 FYB2Q5VWT5 728 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 ALKBH5Q6P6C2 394 aaKnown RBP18.37■□□□□ 0.53
VARS-215ENST00000375663 UNC13DQ70J99 1090 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 AP1M1Q9BXS5 423 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 HMGB1P1B2RPK0 211 aaPredicted RBP18.37■□□□□ 0.53
VARS-215ENST00000375663 TRIM66O15016 1216 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 GYPCP04921 128 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
VARS-215ENST00000375663 PRDX5P30044 214 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 DPYDQ12882 1025 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 NCAPHQ15003 741 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 MMS22LQ6ZRQ5 1243 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 KLHL14Q9P2G3 628 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 ESYT3A0FGR9 886 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 PALMO75781 387 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 SLC8A1P32418 973 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 STMN2Q93045 179 aa18.37■□□□□ 0.53
VARS-215ENST00000375663 HARSP12081 509 aaKnown RBP18.36■□□□□ 0.53
VARS-215ENST00000375663 LMNB1P20700 586 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 NOA1Q8NC60 698 aaKnown RBP18.36■□□□□ 0.53
VARS-215ENST00000375663 SUGCTQ9HAC7 445 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 SERPINA10Q9UK55 444 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 GPATCH4Q5T3I0 446 aaKnown RBP18.36■□□□□ 0.53
VARS-215ENST00000375663 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
VARS-215ENST00000375663 TRIM10Q9UDY6 481 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 PNPLA7Q6ZV29 1317 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 ARHGEF28Q8N1W1 1705 aaKnown RBP18.36■□□□□ 0.53
VARS-215ENST00000375663 MAIP1Q8WWC4 291 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.36■□□□□ 0.53
VARS-215ENST00000375663 ITIH6Q6UXX5 1313 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 SHPRHQ149N8 1683 aa18.36■□□□□ 0.53
VARS-215ENST00000375663 NCK2O43639 380 aa18.35■□□□□ 0.53
VARS-215ENST00000375663 ZNF131P52739 623 aa18.35■□□□□ 0.53
VARS-215ENST00000375663 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
VARS-215ENST00000375663 LMNTD2Q8IXW0 634 aa18.35■□□□□ 0.53
VARS-215ENST00000375663 SPATA4Q8NEY3 305 aa18.35■□□□□ 0.53
VARS-215ENST00000375663 PRDM4Q9UKN5 801 aa18.35■□□□□ 0.53
VARS-215ENST00000375663 AGTPBP1Q9UPW5 1226 aa18.35■□□□□ 0.53
VARS-215ENST00000375663 GFPT1Q06210 699 aaPredicted RBP18.35■□□□□ 0.53
VARS-215ENST00000375663 MESDQ14696 234 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms