RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 GOLGA8BA8MQT2 603 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 NKRFO15226 690 aaKnown RBP eCLIP11.37□□□□□ -0.59
CD48-202ENST00000368046 CTAGE5O15320 804 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 ASGR1P07306 291 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 TXNP10599 105 aaKnown RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 HOXA13P31271 388 aaPredicted RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 ADD1P35611 737 aaKnown RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 EVCP57679 992 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 FUT2Q10981 343 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 RTN1Q16799 776 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 TMEM63BQ5T3F8 832 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 VSIG10LQ86VR7 867 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 C7orf61Q8IZ16 206 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 SCFD2Q8WU76 684 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 PDCD2LQ9BRP1 358 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 PXMP2Q9NR77 195 aa11.37□□□□□ -0.59
CD48-202ENST00000368046 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 NAP1L2Q9ULW6 460 aaPredicted RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
CD48-202ENST00000368046 ELP1O95163 1332 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 PLXNA1Q9UIW2 1896 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 A0A1W2PQ45 241 aaPredicted RBP11.36□□□□□ -0.59
CD48-202ENST00000368046 A0A1W2PQY0 241 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 hCG_1642624A0A1W2PR95 340 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 MYADML2A6NDP7 307 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 ZEB2O60315 1214 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 EIF2AK2P19525 551 aaKnown RBP11.36□□□□□ -0.59
CD48-202ENST00000368046 CDC27P30260 824 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 METAP2P50579 478 aaKnown RBP eCLIP11.36□□□□□ -0.59
CD48-202ENST00000368046 ANAPC15P60006 121 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 TTLL4Q14679 1199 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 SNX17Q15036 470 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 TLK2Q86UE8 772 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 FCHSD1Q86WN1 690 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 CUL5Q93034 780 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 PSTPIP2Q9H939 334 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 STARD7Q9NQZ5 370 aa11.36□□□□□ -0.59
CD48-202ENST00000368046 PIK3CDO00329 1044 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 MEIS2O14770 477 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 CABYRO75952 493 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 MYCLP12524 364 aaPredicted RBP11.35□□□□□ -0.59
CD48-202ENST00000368046 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
CD48-202ENST00000368046 RTP1P59025 263 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 BEX3Q00994 111 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 PGM5Q15124 567 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
CD48-202ENST00000368046 CCDC62Q6P9F0 684 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 KCNV1Q6PIU1 500 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 USP17L6PQ6QN14 398 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 SEPT14Q6ZU15 432 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 ZNF274Q96GC6 653 aaPredicted RBP11.35□□□□□ -0.59
CD48-202ENST00000368046 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 SMCHD1A6NHR9 2005 aa11.35□□□□□ -0.59
CD48-202ENST00000368046 hCG_1984214I3L0E3 225 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 TGFB3P10600 412 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 CCND2P30279 289 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 CPT1AP50416 773 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 CDK7P50613 346 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 TLE2Q04725 743 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 TOB2Q14106 344 aaPredicted RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 TEX2Q8IWB9 1127 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 ZNF713Q8N859 430 aaPredicted RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 ALDH8A1Q9H2A2 487 aaPredicted RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 PDRG1Q9NUG6 133 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 PRKAG2Q9UGJ0 569 aa11.34□□□□□ -0.59
CD48-202ENST00000368046 DDX41Q9UJV9 622 aaKnown RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 ZMYND8Q9ULU4 1186 aaPredicted RBP11.34□□□□□ -0.59
CD48-202ENST00000368046 A6NJR5 290 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 ARVCFO00192 962 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 PRPF3O43395 683 aaKnown RBP11.33□□□□□ -0.6
CD48-202ENST00000368046 KPNA6O60684 536 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 STAM2O75886 525 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 RGS20O76081 388 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 ARIH2O95376 493 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 SYN1P17600 705 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 PTGS1P23219 599 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 BMP8BP34820 402 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 NTRK3Q16288 839 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 LY6KQ17RY6 165 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 XRRA1Q6P2D8 792 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 CXCL17Q6UXB2 119 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 ANKRD33Q7Z3H0 272 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 COPS5Q92905 334 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 GDF15Q99988 308 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 BARHL2Q9NY43 387 aa11.33□□□□□ -0.6
CD48-202ENST00000368046 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms