RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 A0A0C4DFX4 3053 aa17.21■□□□□ 0.35
CTSD-202ENST00000367196 GRXCR1A8MXD5 290 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 E7EWF7 191 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 PBX2P40425 430 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 LAMC2Q13753 1193 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 CHST3Q7LGC8 479 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 SESTD1Q86VW0 696 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 PDCD2LQ9BRP1 358 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 GBF1Q92538 1859 aa17.2■□□□□ 0.34
CTSD-202ENST00000367196 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 GCOM1H8Y6P7 765 aaPredicted RBP17.19■□□□□ 0.34
CTSD-202ENST00000367196 PARNO95453 639 aaKnown RBP17.19■□□□□ 0.34
CTSD-202ENST00000367196 POLR2MP0CAP2 368 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 PTH1RQ03431 593 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 PTGISQ16647 500 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 TMEM67Q5HYA8 995 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 DHX37Q8IY37 1157 aaKnown RBP17.19■□□□□ 0.34
CTSD-202ENST00000367196 PPTC7Q8NI37 304 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 MTA3Q9BTC8 594 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 DDX41Q9UJV9 622 aaKnown RBP17.19■□□□□ 0.34
CTSD-202ENST00000367196 PCDHA11Q9Y5I1 949 aa17.19■□□□□ 0.34
CTSD-202ENST00000367196 MYO9BQ13459 2157 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 OPLAHO14841 1288 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 MYCLP12524 364 aaPredicted RBP17.18■□□□□ 0.34
CTSD-202ENST00000367196 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
CTSD-202ENST00000367196 CCND2P30279 289 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 KIF5BP33176 963 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 TROAPQ12815 778 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 CASC1Q6TDU7 716 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 C7orf31Q8N865 590 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
CTSD-202ENST00000367196 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
CTSD-202ENST00000367196 PPP1R11O60927 126 aaPredicted RBP17.17■□□□□ 0.34
CTSD-202ENST00000367196 DDAH1O94760 285 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 IQCF3P0C7M6 154 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 TGFB3P10600 412 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
CTSD-202ENST00000367196 SCN5AQ14524 2016 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 PGM5Q15124 567 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 GNPTABQ3T906 1256 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
CTSD-202ENST00000367196 PIGSQ96S52 555 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 COL25A1Q9BXS0 654 aaPredicted RBP17.17■□□□□ 0.34
CTSD-202ENST00000367196 FTOQ9C0B1 505 aaKnown RBP eCLIP17.17■□□□□ 0.34
CTSD-202ENST00000367196 NKX2-4Q9H2Z4 354 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 EYSQ5T1H1 3165 aa17.17■□□□□ 0.34
CTSD-202ENST00000367196 MYH7BA7E2Y1 1941 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 STAM2O75886 525 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
CTSD-202ENST00000367196 VSIG10LQ86VR7 867 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 MB21D2Q8IYB1 491 aaPredicted RBP17.16■□□□□ 0.34
CTSD-202ENST00000367196 TMTC2Q8N394 836 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 PHOSPHO2Q8TCD6 241 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
CTSD-202ENST00000367196 GTF2IRD1Q9UHL9 959 aa17.16■□□□□ 0.34
CTSD-202ENST00000367196 RBM8AQ9Y5S9 174 aaKnown RBP17.16■□□□□ 0.34
CTSD-202ENST00000367196 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
CTSD-202ENST00000367196 PPFIA4O75335 1185 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 F2P00734 622 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 MCM5P33992 734 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 PSEN2P49810 448 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 GNAQP50148 359 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 MFSD10Q14728 455 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 KAT2BQ92831 832 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 RRP36Q96EU6 259 aaKnown RBP17.15■□□□□ 0.34
CTSD-202ENST00000367196 SPATA33Q96N06 139 aa17.15■□□□□ 0.34
CTSD-202ENST00000367196 YBX2Q9Y2T7 364 aaKnown RBP17.15■□□□□ 0.34
CTSD-202ENST00000367196 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 CYTH3O43739 400 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 HOXD8P13378 290 aaPredicted RBP17.14■□□□□ 0.33
CTSD-202ENST00000367196 SELPP16109 830 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 KCNJ6P48051 423 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 RBL2Q08999 1139 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 KIAA0753Q2KHM9 967 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
CTSD-202ENST00000367196 MYSM1Q5VVJ2 828 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 GDF6Q6KF10 455 aaPredicted RBP17.14■□□□□ 0.33
CTSD-202ENST00000367196 LRRC8DQ7L1W4 858 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 ZNF654Q8IZM8 581 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 IGDCC4Q8TDY8 1250 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 CUL5Q93034 780 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 MLXIPQ9HAP2 919 aa17.14■□□□□ 0.33
CTSD-202ENST00000367196 TRIP12Q14669 1992 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms