RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 TYW1BQ6NUM6 668 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 DPP8Q6V1X1 898 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 GRAMD1CQ8IYS0 662 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 DAGLBQ8NCG7 672 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 DPF2Q92785 391 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 NSUN4Q96CB9 384 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 C8orf37Q96NL8 207 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 MXD3Q9BW11 206 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 SPZ1Q9BXG8 430 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 TLDC2A0PJX2 215 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 TXNDC9O14530 226 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 TADA3O75528 432 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 SERPING1P05155 500 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 CTNNA2P26232 953 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 PDE6BP35913 854 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAM98CQ17RN3 349 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 CAPN11Q9UMQ6 739 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAM208AQ9UK61 1670 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 DLG5Q8TDM6 1919 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 GAP43P17677 238 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 MFSD14BQ5SR56 506 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 OGFOD1Q8N543 542 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 TBCKQ8TEA7 893 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 NHEJ1Q9H9Q4 299 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 IRAK4Q9NWZ3 460 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 LARSQ9P2J5 1176 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 ADD3Q9UEY8 706 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 XRN1Q8IZH2 1706 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 OPHN1O60890 802 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 AP3B2Q13367 1082 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARHGAP27Q6ZUM4 889 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 FBXO33Q7Z6M2 555 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 PBKQ96KB5 322 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 PLCB1Q9NQ66 1216 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP40Q9NVE5 1235 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 PCDHB13Q9Y5F0 798 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 COL4A3BPQ9Y5P4 624 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 SETD1AO15047 1707 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 ACTN4O43707 911 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 ACTN2P35609 894 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 ZNF131P52739 623 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 MAP7D1Q3KQU3 841 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 RASIP1Q5U651 963 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 CC2D1AQ6P1N0 951 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARHGAP24Q8N264 748 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 KIFAP3Q92845 792 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 GPKOWQ92917 476 aaPredicted RBP eCLIP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 MCUR1Q96AQ8 359 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 RUNDC3BQ96NL0 473 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 RAB17Q9H0T7 212 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 NKIRAS1Q9NYS0 192 aa5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 UTP11Q9Y3A2 253 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-204ENST00000366767 CREB3O43889 395 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 RHOBTB3O94955 611 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 RANBP1P43487 201 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 NTRK3Q16288 839 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SLC10A5Q5PT55 438 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 LRP10Q7Z4F1 713 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 TC2NQ8N9U0 490 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 NEDD1Q8NHV4 660 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 CHURC1Q8WUH1 139 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 CAPS2Q9BXY5 557 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 DHX36Q9H2U1 1008 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 MYH10P35580 1976 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 B4DLN1 442 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 N4BP1O75113 896 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 NTSR2O95665 410 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 XRCC5P13010 732 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 EPHB4P54760 987 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPP1R7Q15435 360 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 C12orf60Q5U649 245 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 OXER1Q8TDS5 423 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 LRRC37A3O60309 1634 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 A0A1W2PQJ5 194 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 F8W031 263 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 RIMBP2O15034 1052 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PSMC4P43686 418 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 CDK8P49336 464 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 HNRNPH2P55795 449 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 IRX5P78411 483 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PDIA5Q14554 519 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 TMCO4Q5TGY1 634 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SYNE4Q8N205 404 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 COA1Q9GZY4 146 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SUFUQ9UMX1 484 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 DAAM1Q9Y4D1 1078 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 HIP1RO75146 1068 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 CHGBP05060 677 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SARSP49591 514 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 GTF2IP78347 998 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 TMED1Q13445 227 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 CDC37Q16543 378 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 KRT26Q7Z3Y9 468 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 GUF1Q8N442 669 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SLC17A8Q8NDX2 589 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 HNRNPLLQ8WVV9 542 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SH3GL3Q99963 347 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 NDST4Q9H3R1 872 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms