RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PNMA8AQ86V59 439 aaPredicted RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 SMYD4Q8IYR2 804 aaPredicted RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 C2CD4AQ8NCU7 369 aaPredicted RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 RCBTB1Q8NDN9 531 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 PJA1Q8NG27 643 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 COPS5Q92905 334 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 RCC1LQ96I51 464 aaKnown RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 FCRL3Q96P31 734 aaPredicted RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 ACO2Q99798 780 aaKnown RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 SARGQ9BW04 601 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 JAM3Q9BX67 310 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 NAA15Q9BXJ9 866 aaKnown RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 MAF1Q9H063 256 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 GBP3Q9H0R5 595 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 IPPKQ9H8X2 491 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 SSU72Q9NP77 194 aaKnown RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 OXSMQ9NWU1 459 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 GEMIN8Q9NWZ8 242 aaKnown RBP2.11□□□□□ -2.07
BRCA1-202ENST00000354071 FBLN5Q9UBX5 448 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 PCDHB12Q9Y5F1 795 aa2.11□□□□□ -2.07
BRCA1-202ENST00000354071 XIRP1Q702N8 1843 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 RGS12O14924 1447 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SYNGAP1Q96PV0 1343 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 TCRBV5S4A2TA0A5A2 114 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CCDC66A2RUB6 948 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 AP1G1O43747 822 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 NFICP08651 508 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 IFIT2P09913 472 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SLC5A1P13866 664 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ARL4DP49703 201 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 INO80DQ53TQ3 878 aaPredicted RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SCARA3Q6AZY7 606 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 FAM117BQ6P1L5 589 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 B3GNT9Q6UX72 402 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CDC37L1Q7L3B6 337 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 OVCH1Q7RTY7 1134 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CPNE8Q86YQ8 564 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 TMEM130Q8N3G9 435 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 PPM1NQ8N819 430 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 NPLOC4Q8TAT6 608 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SEMA6CQ9H3T2 930 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 PCDHA2Q9Y5H9 948 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ARVCFO00192 962 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 RFPL1O75677 317 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CLEC2LP0C7M8 214 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 TRIM27P14373 513 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 KRT15P19012 456 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 MECP2P51608 486 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ZNF143P52747 638 aaPredicted RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 MAP4K2Q12851 820 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 KLF1Q13351 362 aaPredicted RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ACAP2Q15057 778 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 GRAMD1BQ3KR37 738 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 EXOSC6Q5RKV6 272 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 LMBR1LQ6UX01 489 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CMTR2Q8IYT2 770 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SAMD3Q8N6K7 520 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ZBTB34Q8NCN2 500 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ZNF507Q8TCN5 953 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 FBLIM1Q8WUP2 373 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 DIO2Q92813 273 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 LENG1Q96BZ8 264 aaPredicted RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 TAAR9Q96RI9 348 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 UBL7Q96S82 380 aaPredicted RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 FOXQ1Q9C009 403 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CDIP1Q9H305 208 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 BTG4Q9NY30 223 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 USP25Q9UHP3 1055 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 hCG_1642624A0A1W2PR95 340 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 MEGF11A6BM72 1044 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SNUPNO95149 360 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 LTFP02788 710 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 PDE6AP16499 860 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 GPR3P46089 330 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 JAM2P57087 298 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 RASSF7Q02833 373 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 SOX4Q06945 474 aaPredicted RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 ANKRD39Q53RE8 183 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 NUTM2GQ5VZR2 741 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 OSTM1Q86WC4 334 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 AHI1Q8N157 1196 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 KLHL23Q8NBE8 558 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 FAM46AQ96IP4 442 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 TEKT5Q96M29 485 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 DSCC1Q9BVC3 393 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 GTPBP4Q9BZE4 634 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 CEP131Q9UPN4 1083 aa2.1□□□□□ -2.07
BRCA1-202ENST00000354071 APOBEC2Q9Y235 224 aaKnown RBP2.1□□□□□ -2.07
BRCA1-202ENST00000354071 LAMA5O15230 3695 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 GNB5O14775 395 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 NRDCO43847 1150 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 IL33O95760 270 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 CBX7O95931 251 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 SCG5P05408 212 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 COL6A2P12110 1019 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 CCND1P24385 295 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 AMPD2Q01433 879 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 TRIM14Q14142 442 aa2.09□□□□□ -2.07
BRCA1-202ENST00000354071 GRIK4Q16099 956 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms