RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 DEPTORQ8TB45 409 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 DBNDD1Q9H9R9 158 aa12.06□□□□□ -0.48
SMARCE1-202ENST00000348513 CFAP73A6NFT4 308 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 SF3A3Q12874 501 aaKnown RBP eCLIP12.05□□□□□ -0.485e-6■■■■■ 39.5
SMARCE1-202ENST00000348513 PPP2R5CQ13362 524 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 TNFAIP1Q13829 316 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 NOX5Q96PH1 765 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ANTXR1Q9H6X2 564 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 BCAP29Q9UHQ4 241 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 MRPS35P82673 323 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 GABPAQ06546 454 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 POLA2Q14181 598 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 UBL4BQ8N7F7 174 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 LSM14BQ9BX40 385 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 PPP2R2CQ9Y2T4 447 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ARHGAP10A1A4S6 786 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 COBLO75128 1261 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 PFKFB1P16118 471 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 PSMC1P62191 440 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 IGBP1P78318 339 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ZNF280DQ6N043 979 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 TMEM154Q6P9G4 183 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 SEPT8Q92599 483 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 CHMP2BQ9UQN3 213 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 INSRP06213 1382 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 POLR2MP0CAP2 368 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 FAM200BP0CF97 657 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 PSEN1P49768 467 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ADKP55263 362 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 SAMD9Q5K651 1589 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 SIX5Q8N196 739 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ANKRD35Q8N283 1001 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 P3H4Q92791 437 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 HVCN1Q96D96 273 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 PDLIM2Q96JY6 352 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 ATP8A2Q9NTI2 1148 aa12.05□□□□□ -0.48
SMARCE1-202ENST00000348513 BLMP54132 1417 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 XKR9Q5GH70 373 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 NOSTRINQ8IVI9 506 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 STAMBPL1Q96FJ0 436 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 MYOM2P54296 1465 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 LONP1P36776 959 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 MAGEA1P43355 309 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 TBC1D10BQ4KMP7 808 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 FAM186BQ8IYM0 893 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 DDX25Q9UHL0 483 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 UTP11Q9Y3A2 253 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 EIF4E1BA6NMX2 242 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 M0R2C6 588 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 CTNNA1P35221 906 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 TMA7Q9Y2S6 64 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 ASIC3Q9UHC3 531 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 PCDHA12Q9UN75 941 aa12.04□□□□□ -0.48
SMARCE1-202ENST00000348513 NR1I2O75469 434 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 CRCPO75575 148 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 BCRP11274 1271 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 IFRD2Q12894 506 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SLFN13Q68D06 897 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SESTD1Q86VW0 696 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 CHAMP1Q96JM3 812 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 USP28Q96RU2 1077 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 NUP58Q9BVL2 599 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 P4HA2O15460 535 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 PDE8BO95263 885 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 KRT4P19013 534 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ABCB6Q9NP58 842 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 UGGT1Q9NYU2 1555 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 BTBD18B2RXH4 712 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 K7ENM7 598 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ABCB4P21439 1286 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 TSPY1Q01534 308 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 CYP4A11Q02928 519 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 PLCB4Q15147 1175 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 KCTD1Q719H9 257 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ATP6V0A4Q9HBG4 840 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 ADCY9O60503 1353 aa12.03□□□□□ -0.48
SMARCE1-202ENST00000348513 TSPAN9O75954 239 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms