RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 TDO2P48775 406 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-204ENST00000348259 CUL4AQ13619 759 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 BAATQ14032 418 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-204ENST00000348259 ALX1Q15699 326 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 CLEC4DQ8WXI8 215 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 HLA-CQ95604 372 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
MRPL55-204ENST00000348259 WDR11Q9BZH6 1224 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 CHMP5Q9NZZ3 219 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 ZMYM6O95789 1325 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 NMT2O60551 498 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 CXCL10P02778 98 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 ACTN1P12814 892 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
MRPL55-204ENST00000348259 CPT1AP50416 773 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
MRPL55-204ENST00000348259 PDE4BQ07343 736 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 PPARAQ07869 468 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 ADCK5Q3MIX3 580 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 SESTD1Q86VW0 696 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 ARNTL2Q8WYA1 636 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
MRPL55-204ENST00000348259 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-204ENST00000348259 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
MRPL55-204ENST00000348259 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 CCPG1Q9ULG6 757 aa11.3□□□□□ -0.6
MRPL55-204ENST00000348259 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.6
MRPL55-204ENST00000348259 ARIH2O95376 493 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 CYP21A2P08686 494 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
MRPL55-204ENST00000348259 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 FBXL16Q8N461 479 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 OR6J1Q8NGC5 347 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 PPP1R13LQ8WUF5 828 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 DCAF4Q8WV16 495 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 COPS5Q92905 334 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
MRPL55-204ENST00000348259 INCENPQ9NQS7 918 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 PDRG1Q9NUG6 133 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 ADD3Q9UEY8 706 aaKnown RBP11.29□□□□□ -0.6
MRPL55-204ENST00000348259 LIMCH1Q9UPQ0 1083 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 HCN4Q9Y3Q4 1203 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 NLRC5Q86WI3 1866 aa11.29□□□□□ -0.6
MRPL55-204ENST00000348259 RBAK-RBAKDNI3L0D1 243 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 ORC4O43929 436 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 KPNA6O60684 536 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 FGAP02671 866 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
MRPL55-204ENST00000348259 MYL3P08590 195 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 RPS6KB1P23443 525 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 ERVK-21P61565 698 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 DEFB103AP81534 67 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 BLOC1S2Q6QNY1 142 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 FAM178BQ8IXR5 827 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 AFAP1L1Q8TED9 768 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 GDPD5Q8WTR4 605 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 KAT2BQ92831 832 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 SUGCTQ9HAC7 445 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-204ENST00000348259 MYH7BA7E2Y1 1941 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 WDR19Q8NEZ3 1342 aa11.28□□□□□ -0.6
MRPL55-204ENST00000348259 RALGAPA2Q2PPJ7 1873 aa11.27□□□□□ -0.6
MRPL55-204ENST00000348259 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 NBNO60934 754 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 GJB5O95377 273 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 AK2P54819 239 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 BFSP2Q13515 415 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 COL19A1Q14993 1142 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 TRIM71Q2Q1W2 868 aaKnown RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 LEXMQ3ZCV2 418 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 TMCO2Q7Z6W1 182 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 DNERQ8NFT8 737 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 CAGE1Q8TC20 777 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 NAPBQ9H115 298 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 SLKQ9H2G2 1235 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 UBE2ZQ9H832 354 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-204ENST00000348259 STX8Q9UNK0 236 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 MYH6P13533 1939 aa11.27□□□□□ -0.61
MRPL55-204ENST00000348259 LAMA4Q16363 1823 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 MYO7AQ13402 2215 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 LINC01553A4QN01 128 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms