RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 CERS4Q9HA82 394 aa23.37■■□□□ 1.33
KCNQ2-201ENST00000344425 COL20A1Q9P218 1284 aa23.37■■□□□ 1.33
KCNQ2-201ENST00000344425 MTCH2Q9Y6C9 303 aa23.37■■□□□ 1.33
KCNQ2-201ENST00000344425 RFXAPO00287 272 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 IMMTQ16891 758 aaKnown RBP23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 GDF6Q6KF10 455 aaPredicted RBP23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 CHD1LQ86WJ1 897 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 PLEKHM2Q8IWE5 1019 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 ENAHQ8N8S7 591 aaPredicted RBP23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 DSCC1Q9BVC3 393 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 KRT23Q9C075 422 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 VAT1LQ9HCJ6 419 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 ZSWIM5Q9P217 1185 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 CTNNA3Q9UI47 895 aa23.36■■□□□ 1.33
KCNQ2-201ENST00000344425 EIF3JO75822 258 aaKnown RBP23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 SELPP16109 830 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 COL9A1P20849 921 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 TAP1Q03518 808 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 ARNTL2Q8WYA1 636 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 KAT2BQ92831 832 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 KATNAL1Q9BW62 490 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 CNNM2Q9H8M5 875 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 JMJD4Q9H9V9 463 aa23.35■■□□□ 1.33
KCNQ2-201ENST00000344425 TLL1O43897 1013 aa23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 EIF2AK2P19525 551 aaKnown RBP23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 LAMC2Q13753 1193 aa23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 C7orf31Q8N865 590 aa23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 EMID1Q96A84 441 aaPredicted RBP23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 UBAC1Q9BSL1 405 aa23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 GTF2IRD1Q9UHL9 959 aa23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 DDX41Q9UJV9 622 aaKnown RBP23.34■■□□□ 1.33
KCNQ2-201ENST00000344425 CFBP00751 764 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 NR3C2P08235 984 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 BMP1P13497 986 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 LRRC8DQ7L1W4 858 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 AMNQ9BXJ7 453 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 PXMP2Q9NR77 195 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 COG5Q9UP83 839 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 MRVI1Q9Y6F6 885 aa23.33■■□□□ 1.33
KCNQ2-201ENST00000344425 TANC1Q9C0D5 1861 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 NUCB1Q02818 461 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 TFF2Q03403 129 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 RBL2Q08999 1139 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 CNKSR3Q6P9H4 555 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 DHX37Q8IY37 1157 aaKnown RBP23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 CTAGE1Q96RT6 745 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 ZBED2Q9BTP6 218 aa23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 MAP3K20Q9NYL2 800 aaKnown RBP23.33■■□□□ 1.32
KCNQ2-201ENST00000344425 EPOPA6NHQ4 379 aa23.32■■□□□ 1.32
KCNQ2-201ENST00000344425 PSEN2P49810 448 aa23.32■■□□□ 1.32
KCNQ2-201ENST00000344425 WDR5P61964 334 aaKnown RBP23.32■■□□□ 1.32
KCNQ2-201ENST00000344425 IFIT1BQ5T764 474 aaKnown RBP23.32■■□□□ 1.32
KCNQ2-201ENST00000344425 PPTC7Q8NI37 304 aa23.32■■□□□ 1.32
KCNQ2-201ENST00000344425 HDAC6Q9UBN7 1215 aa23.32■■□□□ 1.32
KCNQ2-201ENST00000344425 CKBP12277 381 aa23.31■■□□□ 1.32
KCNQ2-201ENST00000344425 HSD17B4P51659 736 aa23.31■■□□□ 1.32
KCNQ2-201ENST00000344425 KCNV1Q6PIU1 500 aa23.31■■□□□ 1.32
KCNQ2-201ENST00000344425 DHX38Q92620 1227 aaKnown RBP23.31■■□□□ 1.32
KCNQ2-201ENST00000344425 ALG1Q9BT22 464 aa23.31■■□□□ 1.32
KCNQ2-201ENST00000344425 NCOR1O75376 2440 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 TRANK1O15050 2925 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 ABHD14A-ACY1A0A1B0GW23 586 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 EFCAB14O75071 495 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 ARHGEF15O94989 841 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 CXCL10P02778 98 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 PTK7Q13308 1070 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 MFSD10Q14728 455 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 GPNMBQ14956 572 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 KIAA0753Q2KHM9 967 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 SAMD3Q8N6K7 520 aa23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 PRRC2BQ5JSZ5 2229 aaKnown RBP23.3■■□□□ 1.32
KCNQ2-201ENST00000344425 TET1Q8NFU7 2136 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 LAMA4Q16363 1823 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 KLRF2D3W0D1 207 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 F2P00734 622 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 KCNQ1P51787 676 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 GHRHRQ02643 423 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 TRAF1Q13077 416 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 GRB10Q13322 594 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 STAG2Q8N3U4 1231 aa23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 TRIP12Q14669 1992 aaPredicted RBP23.29■■□□□ 1.32
KCNQ2-201ENST00000344425 XIRP2A4UGR9 3374 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 HAS3O00219 553 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 ZBTB5O15062 677 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 PPFIA4O75335 1185 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 MYCLP12524 364 aaPredicted RBP23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 KRT40Q6A162 431 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 PDCD2LQ9BRP1 358 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 PCDHA1Q9Y5I3 950 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 KIAA1217Q5T5P2 1943 aa23.28■■□□□ 1.32
KCNQ2-201ENST00000344425 NBNO60934 754 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 IGHDP01880 384 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 ZNF286BP0CG31 522 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 IKBKEQ14164 716 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 STOX1Q6ZVD7 989 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 HLA-CQ95604 372 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 NECAB3Q96P71 396 aaPredicted RBP23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 RAD9AQ99638 391 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 LMCD1Q9NZU5 365 aa23.27■■□□□ 1.32
KCNQ2-201ENST00000344425 REV3LO60673 3130 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms