RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 DDX25Q9UHL0 483 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 NOVA2Q9UNW9 492 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 UBN2Q6ZU65 1347 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 METP08581 1390 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 PPP1R37O75864 691 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 VSNL1P62760 191 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 CRYMQ14894 314 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 MSL3Q8N5Y2 521 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 PNMA1Q8ND90 353 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 EPC1Q9H2F5 836 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TFAP4Q01664 338 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 PICALMQ13492 652 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TRPC3Q13507 836 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TAF11Q15544 211 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 UAP1Q16222 522 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TEX9Q8N6V9 391 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TMEM51Q9NW97 253 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 ORC2Q13416 577 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 CUL4BQ13620 913 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 TPTE2Q6XPS3 522 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 NLRP14Q86W24 1093 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 U2AF1L4Q8WU68 220 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 EXOC7Q9UPT5 735 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 ZNF609O15014 1411 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 A0A1W2PQJ5 194 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 LGALS16A8MUM7 142 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 PPP2R5AQ15172 486 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 CCDC89Q8N998 374 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 SNX12Q9UMY4 172 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 L1RE1Q9UN81 338 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 HGSO14964 777 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 OPHN1O60890 802 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 AFPP02771 609 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 CEBPAP49715 358 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 PROSER3Q2NL68 480 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 LRRC23Q53EV4 343 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 LRRC31Q6UY01 552 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 CHMP6Q96FZ7 201 aa5.22□□□□□ -1.57
CSMD3-203ENST00000343508 ADD3Q9UEY8 706 aaKnown RBP5.22□□□□□ -1.57
CSMD3-203ENST00000343508 H2AFZP0C0S5 128 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 LSP1P33241 339 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 IRAK1P51617 712 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 H2AFVQ71UI9 128 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 ANKRD42Q8N9B4 389 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 EEF2KMTQ96G04 330 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 FNBP1Q96RU3 617 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 ATP8A2Q9NTI2 1148 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 ANAPC4Q9UJX5 808 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 USP17L12C9JPN9 530 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 USP17L21D6R901 530 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 NR2F2P24468 414 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 EIF4A3P38919 411 aaKnown RBP5.21□□□□□ -1.57
CSMD3-203ENST00000343508 GPBP1Q86WP2 473 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.21□□□□□ -1.57
CSMD3-203ENST00000343508 ZNF473Q8WTR7 871 aaKnown RBP5.21□□□□□ -1.57
CSMD3-203ENST00000343508 IL17RAQ96F46 866 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 SOS2Q07890 1332 aaPredicted RBP5.21□□□□□ -1.57
CSMD3-203ENST00000343508 TTC26A0AVF1 554 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 PRCPP42785 496 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 MTF1Q14872 753 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 FBXW10Q5XX13 1052 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 RSRC2Q7L4I2 434 aaKnown RBP5.21□□□□□ -1.57
CSMD3-203ENST00000343508 CENPKQ9BS16 269 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 TBC1D7Q9P0N9 293 aa5.21□□□□□ -1.57
CSMD3-203ENST00000343508 MYH8P13535 1937 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 MAP3K15Q6ZN16 1313 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 hCG_1642624A0A1W2PR95 340 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 ATP1A1P05023 1023 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 PSMC2P35998 433 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 NUGGCQ68CJ6 796 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 SCYL3Q8IZE3 742 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 LRRC37BQ96QE4 947 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 BIN2Q9UBW5 565 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 FTCDO95954 541 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 PLTPP55058 493 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 ATP2C1P98194 919 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 CHRNA2Q15822 529 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 SEPT14Q6ZU15 432 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 NBPF5PQ86XG9 351 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 APLFQ8IW19 511 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 RAB3IL1Q8TBN0 382 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 LY9Q9HBG7 655 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 KLRF2D3W0D1 207 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 FAM26FQ5R3K3 315 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 SUDS3Q9H7L9 328 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 RPS6KA5O75582 802 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 CCDC93Q567U6 631 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 CCNI2Q6ZMN8 369 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 RHOT2Q8IXI1 618 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 MB21D2Q8IYB1 491 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 CEP120Q8N960 986 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 MAGOHBQ96A72 148 aaKnown RBP5.21□□□□□ -1.58
CSMD3-203ENST00000343508 HVCN1Q96D96 273 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 SPATA31D1Q6ZQQ2 1576 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 EXOC3O60645 756 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 PALMO75781 387 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 IFNAR2P48551 515 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 NELFCDQ8IXH7 590 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 ANKRD13CQ8N6S4 541 aa5.21□□□□□ -1.58
CSMD3-203ENST00000343508 FAM133AQ8N9E0 248 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms