RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 USP17L11C9JVI0 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L18D6R9N7 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L22D6RA61 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L17D6RBQ6 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L19D6RCP7 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L20D6RJB6 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L24Q0WX57 530 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L6PQ6QN14 398 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 VSTM4Q8IW00 320 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 PPP1R13BQ96KQ4 1090 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 HYOU1Q9Y4L1 999 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 CASP1P29466 404 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 SNX16P57768 344 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 CPLX4Q7Z7G2 160 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 MROH2AA6NES4 1674 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 KCNK3O14649 394 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 PAK2Q13177 524 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 SND1Q7KZF4 910 aaKnown RBP eCLIP17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 CCDC105Q8IYK2 499 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 FAM186BQ8IYM0 893 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 SLC7A3Q8WY07 619 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 GDAQ9Y2T3 454 aa17.14■□□□□ 0.33
CARMIL3-201ENST00000342740 USP17L10C9JJH3 530 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 EBAG9O00559 213 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 CLIC2O15247 247 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 PTPROQ16827 1216 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 TCP1P17987 556 aaKnown RBP17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 PSMC2P35998 433 aaKnown RBP17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 AP3B2Q13367 1082 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 CDHR1Q96JP9 859 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 TXNDC16Q9P2K2 825 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 PSMD2Q13200 908 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 CUL4BQ13620 913 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 PPLO60437 1756 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 DEPDC5O75140 1603 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 KIF28PB7ZC32 967 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 F5H6K3 240 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 GUCY1A2P33402 732 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 KLRC3Q07444 240 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 GDAP1L1Q96MZ0 367 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
CARMIL3-201ENST00000342740 HPDP32754 393 aaPredicted RBP17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 POTEMA6NI47 508 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 ANKFY1Q9P2R3 1169 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 DDX41Q9UJV9 622 aaKnown RBP17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 SEPT14Q6ZU15 432 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 PARVGQ9HBI0 331 aa17.12■□□□□ 0.33
CARMIL3-201ENST00000342740 GOLGA6BA6NDN3 693 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 M0QZ92 97 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 P4HA1P13674 534 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 AKR1B1P15121 316 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 YWHAEP62258 255 aaKnown RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 TAF12Q16514 161 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 LONRF2Q1L5Z9 754 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 RCSD1Q6JBY9 416 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 EFCAB8A8MWE9 144 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 AFPP02771 609 aaKnown RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 RASSF7Q02833 373 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 CLUL1Q15846 466 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 ADPGKQ9BRR6 497 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 THAP9Q9H5L6 903 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 HSPA1LP34931 641 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 CCDC63Q8NA47 563 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 BZW2Q9Y6E2 419 aaKnown RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 TMOD1P28289 359 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 IGBP1P78318 339 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 SREK1Q8WXA9 508 aaKnown RBP17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
CARMIL3-201ENST00000342740 CCNA1P78396 465 aa17.1■□□□□ 0.33
CARMIL3-201ENST00000342740 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
CARMIL3-201ENST00000342740 KRT31Q15323 416 aa17.1■□□□□ 0.33
CARMIL3-201ENST00000342740 MEGF6O75095 1541 aa17.1■□□□□ 0.33
CARMIL3-201ENST00000342740 TMEM191BP0C7N4 346 aa17.1■□□□□ 0.33
CARMIL3-201ENST00000342740 MYL7Q01449 175 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms