RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 HPDP32754 393 aaPredicted RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 KRT83P78385 493 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 SNX1Q13596 522 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 LACTB2Q53H82 288 aaPredicted RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 SMCR8Q8TEV9 937 aaPredicted RBP16.97■□□□□ 0.31
LIMK2-203ENST00000340552 ITFG2Q969R8 447 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 TRPC6Q9Y210 931 aa16.97■□□□□ 0.31
LIMK2-203ENST00000340552 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 BBOX1O75936 387 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 HOXA10P31260 410 aaPredicted RBP16.96■□□□□ 0.31
LIMK2-203ENST00000340552 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.31
LIMK2-203ENST00000340552 UBXN1Q04323 297 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 PPP4R3AQ6IN85 833 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 NLGN1Q8N2Q7 840 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 CUL5Q93034 780 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
LIMK2-203ENST00000340552 CSRNP2Q9H175 543 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 GMNCA6NCL1 334 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 CARSP49589 748 aaKnown RBP16.96■□□□□ 0.31
LIMK2-203ENST00000340552 TRIM29Q14134 588 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 ZNF804AQ7Z570 1209 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 CD302Q8IX05 232 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 RNF41Q9H4P4 317 aaPredicted RBP16.96■□□□□ 0.31
LIMK2-203ENST00000340552 NFU1Q9UMS0 254 aa16.96■□□□□ 0.31
LIMK2-203ENST00000340552 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 BACH1O14867 736 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 IFIT3O14879 490 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 RANBP6O60518 1105 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 UFL1O94874 794 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 GLE1Q53GS7 698 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 TCP11X2Q5H9J9 407 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 CAPRIN2Q6IMN6 1127 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 APOA5Q6Q788 366 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 CPSF2Q9P2I0 782 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 PCDHB6Q9Y5E3 794 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 KCNJ18B7U540 433 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 DNAJC8O75937 253 aaPredicted RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 RBBP5Q15291 538 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 MIS18BP1Q6P0N0 1132 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 ZNF579Q8NAF0 562 aaKnown RBP16.95■□□□□ 0.3
LIMK2-203ENST00000340552 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 PAGE5Q96GU1 130 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 PSMB7Q99436 277 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 BRIP1Q9BX63 1249 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 C15orf41Q9Y2V0 281 aa16.95■□□□□ 0.3
LIMK2-203ENST00000340552 ZSCAN5CA6NGD5 496 aaPredicted RBP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 SMNDC1O75940 238 aaKnown RBP eCLIP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 PECAM1P16284 738 aaPredicted RBP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 CXCR5P32302 372 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 VAV2P52735 878 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 SGMS1Q86VZ5 419 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 HVCN1Q96D96 273 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 MAST2Q6P0Q8 1798 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 ESYT3A0FGR9 886 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 HMGB1P1B2RPK0 211 aaPredicted RBP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 CDKL5O76039 1030 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 LIFRP42702 1097 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 CYP27A1Q02318 531 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 HIBCHQ6NVY1 386 aaPredicted RBP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 C8orf74Q6P047 294 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 NFRKBQ6P4R8 1299 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 SPAG5Q96R06 1193 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 ANAPC4Q9UJX5 808 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 SRPRBQ9Y5M8 271 aaKnown RBP16.94■□□□□ 0.3
LIMK2-203ENST00000340552 CAPN6Q9Y6Q1 641 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 TRAPPC3O43617 180 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 GLI1P08151 1106 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 NTRK3Q16288 839 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 MICU3Q86XE3 530 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 CCT6BQ92526 530 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 HOMER3Q9NSC5 361 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 IRAK4Q9NWZ3 460 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 L3MBTL1Q9Y468 752 aa16.94■□□□□ 0.3
LIMK2-203ENST00000340552 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 ANP32DO95626 131 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 RAB27AP51159 221 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 RPS6KA3P51812 740 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
LIMK2-203ENST00000340552 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
LIMK2-203ENST00000340552 EPSTI1Q96J88 318 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms