RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 NAP1L4Q99733 375 aaKnown RBP17.14■□□□□ 0.33
TUBB4B-201ENST00000340384 R3HDMLQ9H3Y0 253 aa17.14■□□□□ 0.33
TUBB4B-201ENST00000340384 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.33
TUBB4B-201ENST00000340384 IMPACTQ9P2X3 320 aa17.14■□□□□ 0.33
TUBB4B-201ENST00000340384 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 SEMA3FQ13275 785 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 ISM2Q6H9L7 571 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 CUL5Q93034 780 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 MAGEF1Q9HAY2 307 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 RIC8AQ9NPQ8 531 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 ZNF214Q9UL59 606 aaPredicted RBP17.13■□□□□ 0.33
TUBB4B-201ENST00000340384 ADGRA2Q96PE1 1338 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 CCNT1O60563 726 aaKnown RBP17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 MYL1P05976 194 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 ERCC5P28715 1186 aaPredicted RBP17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 UBA7P41226 1012 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 GSDMDP57764 484 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 NCAPHQ15003 741 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 Q3C1V9 767 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 CCSER1Q9C0I3 900 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 CUEDC2Q9H467 287 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 RIPK3Q9Y572 518 aa17.12■□□□□ 0.33
TUBB4B-201ENST00000340384 FOXN1O15353 648 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 GTPBP6O43824 516 aaPredicted RBP17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 OSBPP22059 807 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 MAP2K2P36507 400 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 STAT6P42226 847 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 TRAF1Q13077 416 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.331e-13■■□□□ 13.7
TUBB4B-201ENST00000340384 E2F4Q16254 413 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 LETM2Q2VYF4 491 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 CCDC174Q6PII3 467 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 COA7Q96BR5 231 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 A0A0G2JMZ2 1700 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
TUBB4B-201ENST00000340384 A0A087X0B3 334 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 OFD1O75665 1012 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 PTGS1P23219 599 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 AFMP43652 599 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 DPYDQ12882 1025 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 IL17AQ16552 155 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 ENOX1Q8TC92 643 aaKnown RBP17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 RAB34Q9BZG1 259 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 DISC1Q9NRI5 854 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 BIN2Q9UBW5 565 aaPredicted RBP17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 OPLAHO14841 1288 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 JAKMIP3Q5VZ66 844 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 PDXDC2PQ6P474 469 aa17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
TUBB4B-201ENST00000340384 THSD7BQ9C0I4 1608 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 NRDCO43847 1150 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 ZBED4O75132 1171 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 ICAM1P05362 532 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 FANCCQ00597 558 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 TEX2Q8IWB9 1127 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 CPXCR1Q8N123 301 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 IFNKQ9P0W0 207 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 PNMA3Q9UL41 463 aa17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
TUBB4B-201ENST00000340384 SERPINC1P01008 464 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 FDX1P10109 184 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 CRHR2Q13324 411 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 PARK7Q99497 189 aaKnown RBP17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 RABGAP1Q9Y3P9 1069 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 PCDHA1Q9Y5I3 950 aa17.08■□□□□ 0.32
TUBB4B-201ENST00000340384 TAF1CQ15572 869 aaPredicted RBP17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 CALCRLQ16602 461 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 USH1GQ495M9 461 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 C17orf99Q6UX52 265 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 ANKRD13CQ8N6S4 541 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 MB21D1Q8N884 522 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 CLEC4DQ8WXI8 215 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 TBC1D5Q92609 795 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
TUBB4B-201ENST00000340384 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms