RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 E7EVH7 732 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 USP14P54578 494 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 JRKLQ9Y4A0 524 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 NPHP3-ACAD11A0A0J9YXS1 232 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 INPP5BP32019 993 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 PPP1R2P41236 205 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 TMEM139Q8IV31 216 aa12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 ARMCX3Q9UH62 379 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-201ENST00000339861 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 STAT3P40763 770 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 PAK2Q13177 524 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 EZH2Q15910 746 aaKnown RBP12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 CDKAL1Q5VV42 579 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 CCDC174Q6PII3 467 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 HS2ST1Q7LGA3 356 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 CPLX4Q7Z7G2 160 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 CEP57Q86XR8 500 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 RPGRIP1Q96KN7 1286 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 VEZTQ9HBM0 779 aa12.21□□□□□ -0.46
SEMA4D-201ENST00000339861 EPB41P11171 864 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 SH2D3CQ8N5H7 860 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 COG1Q8WTW3 980 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 MED15Q96RN5 788 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 CAPN11Q9UMQ6 739 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 PRPF6O94906 941 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 GDF11O95390 407 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 RSRC2Q7L4I2 434 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 MST1RQ04912 1400 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 POTECB2RU33 542 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 ORC4O43929 436 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 PALMO75781 387 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 AK8Q96MA6 479 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 UBAP1LF5GYI3 381 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 ADAMTS3O15072 1205 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 ZRANB2O95218 330 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 RCAN1P53805 252 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 GRM4Q14833 912 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 GALNT17Q6IS24 598 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 RBM17Q96I25 401 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
SEMA4D-201ENST00000339861 KRIT1O00522 736 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 KRT71Q3SY84 523 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 MSL1Q68DK7 614 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 MICALCLQ6ZW33 695 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 MYMKA6NI61 221 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 LRRN2O75325 713 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 E2F4Q16254 413 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 LINC00116Q8NCU8 138 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 OSBPL9Q96SU4 736 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 RGPD1P0DJD0 1748 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 USP17L10C9JJH3 530 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 NEFHP12036 1026 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 APBA1Q02410 837 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 RETREG2Q8NC44 543 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 DBNDD1Q9H9R9 158 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 CAPN7Q9Y6W3 813 aa12.19□□□□□ -0.46
SEMA4D-201ENST00000339861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 GOLGA6L10A0A0M3HER8 536 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 BACH1O14867 736 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 HAUS3Q68CZ6 603 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 MTA3Q9BTC8 594 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 THRAP3Q9Y2W1 955 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 LAD1O00515 517 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 TNFAIP3P21580 790 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 RPL13P26373 211 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 CETN1Q12798 172 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 IL17AQ16552 155 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 SPATA4Q8NEY3 305 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 SCLT1Q96NL6 688 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 L1RE1Q9UN81 338 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 STXBP3O00186 592 aa12.18□□□□□ -0.46
SEMA4D-201ENST00000339861 PLA2G4BP0C869 781 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms