RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 PTPRSQ13332 1948 aa18.6■□□□□ 0.57
MUC1-201ENST00000337604 RBAK-RBAKDNI3L0D1 243 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 RGS20O76081 388 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 CFBP00751 764 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 IQCF3P0C7M6 154 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 ATP2A2P16615 1042 aaKnown RBP18.59■□□□□ 0.57
MUC1-201ENST00000337604 ARHGEF16Q5VV41 709 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 CHST3Q7LGC8 479 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 DDX41Q9UJV9 622 aaKnown RBP18.59■□□□□ 0.57
MUC1-201ENST00000337604 SUPT16HQ9Y5B9 1047 aaKnown RBP18.59■□□□□ 0.57
MUC1-201ENST00000337604 PCDHA11Q9Y5I1 949 aa18.59■□□□□ 0.57
MUC1-201ENST00000337604 PALM3A6NDB9 673 aaPredicted RBP18.58■□□□□ 0.56
MUC1-201ENST00000337604 ZBTB5O15062 677 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 NR3C2P08235 984 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 CHMLP26374 656 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 CHMP4BP1P59074 171 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 GDF6Q6KF10 455 aaPredicted RBP18.58■□□□□ 0.56
MUC1-201ENST00000337604 SESTD1Q86VW0 696 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 IL31RAQ8NI17 732 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
MUC1-201ENST00000337604 DHX38Q92620 1227 aaKnown RBP18.58■□□□□ 0.56
MUC1-201ENST00000337604 MYH7BA7E2Y1 1941 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 CYTH3O43739 400 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 HOXA13P31271 388 aaPredicted RBP18.57■□□□□ 0.56
MUC1-201ENST00000337604 RFC2P35250 354 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 GRM4Q14833 912 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 GPNMBQ14956 572 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 PTGISQ16647 500 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 PPP2R2DQ66LE6 453 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 STOX1Q6ZVD7 989 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
MUC1-201ENST00000337604 PDCD2LQ9BRP1 358 aa18.57■□□□□ 0.56
MUC1-201ENST00000337604 PRRC2BQ5JSZ5 2229 aaKnown RBP18.57■□□□□ 0.56
MUC1-201ENST00000337604 EIF3JO75822 258 aaKnown RBP18.56■□□□□ 0.56
MUC1-201ENST00000337604 ARHGEF15O94989 841 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 ZNF286BP0CG31 522 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 HOMER1Q86YM7 354 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 RIOX1Q9H6W3 641 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 NOD1Q9Y239 953 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 PCDHA1Q9Y5I3 950 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 REV3LO60673 3130 aa18.56■□□□□ 0.56
MUC1-201ENST00000337604 NCOR1O75376 2440 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 F2P00734 622 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 CA3P07451 260 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 HOXD8P13378 290 aaPredicted RBP18.55■□□□□ 0.56
MUC1-201ENST00000337604 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
MUC1-201ENST00000337604 IGFBP4P22692 258 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 ANTXR2P58335 489 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 RBL2Q08999 1139 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 BFSP2Q13515 415 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 PGM5Q15124 567 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 DGKDQ16760 1214 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 TJAP1Q5JTD0 557 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 RETREG2Q8NC44 543 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 PPTC7Q8NI37 304 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 PIGSQ96S52 555 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
MUC1-201ENST00000337604 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
MUC1-201ENST00000337604 E7EWF7 191 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 HAS3O00219 553 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 IFIT3O14879 490 aaKnown RBP18.54■□□□□ 0.56
MUC1-201ENST00000337604 SGSM2O43147 1006 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
MUC1-201ENST00000337604 TROAPQ12815 778 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 TRDNQ13061 729 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 CCDC85BQ15834 202 aaPredicted RBP18.54■□□□□ 0.56
MUC1-201ENST00000337604 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 GPKOWQ92917 476 aaPredicted RBP eCLIP18.54■□□□□ 0.56
MUC1-201ENST00000337604 WNT8BQ93098 351 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 SLC9A7Q96T83 725 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 TRANK1O15050 2925 aa18.54■□□□□ 0.56
MUC1-201ENST00000337604 EPOPA6NHQ4 379 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 SORBS3O60504 671 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 MYCLP12524 364 aaPredicted RBP18.53■□□□□ 0.56
MUC1-201ENST00000337604 ACTN1P12814 892 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 UBA1P22314 1058 aaKnown RBP18.53■□□□□ 0.56
MUC1-201ENST00000337604 PSEN2P49810 448 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 LAMC2Q13753 1193 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 HIC1Q14526 733 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 TCTN1Q2MV58 587 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 VSIG10LQ86VR7 867 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 RUFY2Q8WXA3 655 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 ZFP91Q96JP5 570 aaPredicted RBP18.53■□□□□ 0.56
MUC1-201ENST00000337604 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
MUC1-201ENST00000337604 MAP3K20Q9NYL2 800 aaKnown RBP18.53■□□□□ 0.56
MUC1-201ENST00000337604 THEGQ9P2T0 379 aa18.53■□□□□ 0.56
MUC1-201ENST00000337604 SELPP16109 830 aa18.52■□□□□ 0.56
MUC1-201ENST00000337604 SP2Q02086 613 aa18.52■□□□□ 0.56
MUC1-201ENST00000337604 COL9A3Q14050 684 aaPredicted RBP18.52■□□□□ 0.56
MUC1-201ENST00000337604 MFSD10Q14728 455 aa18.52■□□□□ 0.56
MUC1-201ENST00000337604 KIAA0753Q2KHM9 967 aa18.52■□□□□ 0.56
MUC1-201ENST00000337604 TRIM71Q2Q1W2 868 aaKnown RBP18.52■□□□□ 0.56
MUC1-201ENST00000337604 HSDL1Q3SXM5 330 aa18.52■□□□□ 0.56
MUC1-201ENST00000337604 MYSM1Q5VVJ2 828 aa18.52■□□□□ 0.56
MUC1-201ENST00000337604 TRAF7Q6Q0C0 670 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms