RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CNNM4Q6P4Q7 775 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 USP17L2Q6R6M4 530 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 DNAAF5Q86Y56 855 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
HIF1A-202ENST00000337138 SELENOOQ9BVL4 669 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 PACSIN2Q9UNF0 486 aaPredicted RBP11.21□□□□□ -0.61
HIF1A-202ENST00000337138 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 TACC1O75410 805 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 PAFAH1B1P43034 410 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
HIF1A-202ENST00000337138 TXNRD3Q86VQ6 643 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 COG1Q8WTW3 980 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 MS4A14Q96JA4 679 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 LRRC1Q9BTT6 524 aa11.21□□□□□ -0.61
HIF1A-202ENST00000337138 GOLGA6L10A6NI86 522 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 PDE2AO00408 941 aaPredicted RBP11.21□□□□□ -0.62
HIF1A-202ENST00000337138 RHOBTB3O94955 611 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 CALML3P27482 149 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 TNNI2P48788 182 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 CCDC40Q4G0X9 1142 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 FAM212AQ96EL1 285 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 JPH2Q9BR39 696 aaPredicted RBP11.21□□□□□ -0.62
HIF1A-202ENST00000337138 SH3GLB2Q9NR46 395 aa11.21□□□□□ -0.62
HIF1A-202ENST00000337138 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.62
HIF1A-202ENST00000337138 GOLGA6L7A0A1B0GV03 622 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 LGALS16A8MUM7 142 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 EIF4A3P38919 411 aaKnown RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 MAGEA1P43355 309 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 USP14P54578 494 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 CKAP4Q07065 602 aaKnown RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 UBE4AQ14139 1066 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 GRIK5Q16478 980 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 SH2D3CQ8N5H7 860 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 PCDHA6Q9UN73 950 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 PCDHA8Q9Y5H6 950 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 WDR81Q562E7 1941 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 KRT18P05783 430 aaKnown RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 HPDP32754 393 aaPredicted RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 GNGT1P63211 74 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 CDK17Q00537 523 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 PICALMQ13492 652 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 TRIM14Q14142 442 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 DNM2P50570 870 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 SEMA3FQ13275 785 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 SPTY2D1Q68D10 685 aaPredicted RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 CLEC4GQ6UXB4 293 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 LRRC31Q6UY01 552 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 DMGDHQ9UI17 866 aaKnown RBP11.2□□□□□ -0.62
HIF1A-202ENST00000337138 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
HIF1A-202ENST00000337138 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 KCNQ2O43526 872 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 FTCDO95954 541 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 NOP2P46087 812 aaKnown RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 APBA1Q02410 837 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 NBPF5PQ86XG9 351 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 CALML4Q96GE6 196 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 SHOX2O60902 331 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 SIK1P57059 783 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 CAPN6Q9Y6Q1 641 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 STXBP3O00186 592 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 TRAF5O00463 557 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 GFPT1Q06210 699 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-202ENST00000337138 P2RX5Q93086 422 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
HIF1A-202ENST00000337138 SRGNP10124 158 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 LONP1P36776 959 aaKnown RBP11.18□□□□□ -0.62
HIF1A-202ENST00000337138 NAA25Q14CX7 972 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 DDB1Q16531 1140 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 CLEC10AQ8IUN9 316 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 COA7Q96BR5 231 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 PCDHA4Q9UN74 947 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 SPATA31A5Q5VU36 1347 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 SPATA31A7Q8IWB4 1347 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-202ENST00000337138 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-202ENST00000337138 MCM3P25205 808 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 PDCLQ13371 301 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 RAPGEF1Q13905 1077 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 C8orf74Q6P047 294 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 ZC3H3Q8IXZ2 948 aaKnown RBP11.18□□□□□ -0.62
HIF1A-202ENST00000337138 EHBP1Q8NDI1 1231 aa11.18□□□□□ -0.62
HIF1A-202ENST00000337138 ALS2CR12Q96Q35 445 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms