RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 ATP11BQ9Y2G3 1177 aa12.66□□□□□ -0.38
APOBEC3B-201ENST00000333467 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
APOBEC3B-201ENST00000333467 A0A1W2PQ45 241 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 A0A1W2PQY0 241 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 SNX17Q15036 470 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 TRIM60Q495X7 471 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 ASPRV1Q53RT3 343 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 IFIT1BQ5T764 474 aaKnown RBP12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 NSUN7Q8NE18 718 aaKnown RBP12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 PURBQ96QR8 312 aaKnown RBP12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 R3HCC1Q9Y3T6 440 aaKnown RBP12.65□□□□□ -0.38
APOBEC3B-201ENST00000333467 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 A0A1W2PPC1 479 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 MYADML2A6NDP7 307 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 ASB14A6NK59 587 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 SCRN1Q12765 414 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 TRDNQ13061 729 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 SEC23AQ15436 765 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 USH1GQ495M9 461 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 SLC39A5Q6ZMH5 540 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 STOX1Q6ZVD7 989 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 FBXO16Q8IX29 292 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 BICD2Q8TD16 824 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 DACT1Q9NYF0 836 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
APOBEC3B-201ENST00000333467 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 E7EWF7 191 aa12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 LIG1P18858 919 aa12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 CDC25BP30305 580 aa12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 ALDH5A1P51649 535 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 STK3Q13188 491 aa12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 DHX8Q14562 1220 aaKnown RBP12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 CLEC4DQ8WXI8 215 aa12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
APOBEC3B-201ENST00000333467 UQCRHLA0A096LP55 91 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 UQCRHP07919 91 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 C6orf222P0C671 652 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 CALML3P27482 149 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 CST5P28325 142 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 BMP8BP34820 402 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 RNF207Q6ZRF8 634 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 EEPD1Q7L9B9 569 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 UPF3AQ9H1J1 476 aaKnown RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 NEMFO60524 1076 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 JAK2O60674 1132 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 ACLYP53396 1101 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 C1orf53Q5VUE5 145 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 CCSAPQ6IQ19 270 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 SARM1Q6SZW1 724 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 CCDC73Q6ZRK6 1079 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 KLHDC9Q8NEP7 349 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 MYRIPQ8NFW9 859 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 UBE2OQ9C0C9 1292 aaKnown RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 PDLIM7Q9NR12 457 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 ADD3Q9UEY8 706 aaKnown RBP12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 PRKAG2Q9UGJ0 569 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 TANC1Q9C0D5 1861 aa12.62□□□□□ -0.39
APOBEC3B-201ENST00000333467 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 PTGS1P23219 599 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 GJA9P57773 515 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 KCNA10Q16322 511 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 QRICH1Q2TAL8 776 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 CHST3Q7LGC8 479 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 MORC4Q8TE76 937 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 TSEN34Q9BSV6 310 aaKnown RBP12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
APOBEC3B-201ENST00000333467 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms