RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 CATIPQ7Z7H3 387 aa16.39■□□□□ 0.21
RPAIN-201ENST00000327154 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
RPAIN-201ENST00000327154 MAP3K20Q9NYL2 800 aaKnown RBP16.39■□□□□ 0.21
RPAIN-201ENST00000327154 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
RPAIN-201ENST00000327154 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
RPAIN-201ENST00000327154 PNMA6FA0A0J9YX94 578 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
RPAIN-201ENST00000327154 TRAF1Q13077 416 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 MB21D2Q8IYB1 491 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-201ENST00000327154 SAMD3Q8N6K7 520 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 RETREG2Q8NC44 543 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 KAT2BQ92831 832 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 PDCD2LQ9BRP1 358 aa16.38■□□□□ 0.21
RPAIN-201ENST00000327154 ZBBXA8MT70 800 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 GCOM1H8Y6P7 765 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-201ENST00000327154 POLR2MP0CAP2 368 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 RAB30Q15771 203 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 DGKDQ16760 1214 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 VSIG10LQ86VR7 867 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
RPAIN-201ENST00000327154 ZFP91Q96JP5 570 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-201ENST00000327154 NOD1Q9Y239 953 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 SLC4A7Q9Y6M7 1214 aa16.37■□□□□ 0.21
RPAIN-201ENST00000327154 RGS20O76081 388 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 IQCF3P0C7M6 154 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 RABGGTBP53611 331 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 PGM5Q15124 567 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 PTGISQ16647 500 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 IL31RAQ8NI17 732 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 EMID1Q96A84 441 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-201ENST00000327154 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 NKX2-4Q9H2Z4 354 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 PRDM12Q9H4Q4 367 aa16.36■□□□□ 0.21
RPAIN-201ENST00000327154 YBX2Q9Y2T7 364 aaKnown RBP16.36■□□□□ 0.21
RPAIN-201ENST00000327154 PITPNM1O00562 1244 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 SORBS3O60504 671 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 PFKMP08237 780 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 BFSP2Q13515 415 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 GDF6Q6KF10 455 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-201ENST00000327154 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 PPTC7Q8NI37 304 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 ALG1Q9BT22 464 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 FTOQ9C0B1 505 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPAIN-201ENST00000327154 LSG1Q9H089 658 aaKnown RBP16.35■□□□□ 0.21
RPAIN-201ENST00000327154 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 LY9Q9HBG7 655 aa16.35■□□□□ 0.21
RPAIN-201ENST00000327154 PRC1O43663 620 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 MYOGP15173 224 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
RPAIN-201ENST00000327154 CCND2P30279 289 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 RFC2P35250 354 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 PSEN2P49810 448 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 SP2Q02086 613 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
RPAIN-201ENST00000327154 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 KCNV1Q6PIU1 500 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 SESTD1Q86VW0 696 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 C7orf31Q8N865 590 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-201ENST00000327154 CTAGE1Q96RT6 745 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 COL25A1Q9BXS0 654 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-201ENST00000327154 HDAC6Q9UBN7 1215 aa16.34■□□□□ 0.21
RPAIN-201ENST00000327154 SLC27A2O14975 620 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 GGPS1O95749 300 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 TGFB3P10600 412 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 KIF5BP33176 963 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 MCM5P33992 734 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-201ENST00000327154 MFSD10Q14728 455 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 KIAA0753Q2KHM9 967 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 HSDL1Q3SXM5 330 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 TMTC2Q8N394 836 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 GPKOWQ92917 476 aaPredicted RBP eCLIP16.33■□□□□ 0.2
RPAIN-201ENST00000327154 RRP36Q96EU6 259 aaKnown RBP16.33■□□□□ 0.2
RPAIN-201ENST00000327154 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 GAS2L1Q99501 681 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-201ENST00000327154 MAP3K14Q99558 947 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
RPAIN-201ENST00000327154 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 DDAH1O94760 285 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 ACTN1P12814 892 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 NECTIN1Q15223 517 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 CREB3L3Q68CJ9 461 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 CCDC155Q8N6L0 562 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 USP38Q8NB14 1042 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 CAGE1Q8TC20 777 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 MTA3Q9BTC8 594 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 SPZ1Q9BXG8 430 aa16.32■□□□□ 0.2
RPAIN-201ENST00000327154 BCAS3Q9H6U6 928 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms