RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RBM47A0AV96 593 aaKnown RBP20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 MYCLP12524 364 aaPredicted RBP20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 CCL5P13501 91 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 ANP32AP39687 249 aaKnown RBP20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 GNL2Q13823 731 aaKnown RBP20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 TTLL4Q14679 1199 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 NIPA1Q7RTP0 329 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 TNS4Q8IZW8 715 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 GPRASP2Q96D09 838 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 INPP4AQ96PE3 977 aaPredicted RBP20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 RNF208Q9H0X6 261 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 Q9Y3F1 56 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 PLXNA1Q9UIW2 1896 aa20.41■□□□□ 0.86
SSSCA1-201ENST00000309328 RARBP10826 455 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 CNGA1P29973 690 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 SETQ01105 290 aaPredicted RBP20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 CCDC144BQ3MJ40 725 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 CEP55Q53EZ4 464 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 MOXD1Q6UVY6 613 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 FBXO16Q8IX29 292 aaPredicted RBP20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 CRYGNQ8WXF5 182 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 TMEM260Q9NX78 707 aa20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 DDX20Q9UHI6 824 aaKnown RBP20.4■□□□□ 0.86
SSSCA1-201ENST00000309328 CENPFP49454 3210 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 FIBPO43427 364 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 GJB1P08034 283 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 GCFC2P16383 781 aaKnown RBP20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 ICAM3P32942 547 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 CIITAP33076 1130 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 ZNF76P36508 570 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 TRIM32Q13049 653 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 GIMAP8Q8ND71 665 aaPredicted RBP20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 IL31RAQ8NI17 732 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 RASGRP4Q8TDF6 673 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 SPC25Q9HBM1 224 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 GJB4Q9NTQ9 266 aa20.39■□□□□ 0.85
SSSCA1-201ENST00000309328 MRPS9P82933 396 aaKnown RBP20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 TNFAIP2Q03169 654 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 DUSP28Q4G0W2 176 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 TAPT1Q6NXT6 567 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 TRPV1Q8NER1 839 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 TBCKQ8TEA7 893 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 SENP7Q9BQF6 1050 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 WDR11Q9BZH6 1224 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 UNC93B1Q9H1C4 597 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 UBIAD1Q9Y5Z9 338 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 MRVI1Q9Y6F6 885 aa20.38■□□□□ 0.85
SSSCA1-201ENST00000309328 BTBD18B2RXH4 712 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 U2AF2P26368 475 aaKnown RBP eCLIP20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 CCND3P30281 292 aaPredicted RBP20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 TRAPPC10P48553 1259 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 MTMR1Q13613 665 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 PRAMEF19Q5SWL8 479 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 SEPT14Q6ZU15 432 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 PIK3AP1Q6ZUJ8 805 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 EEPD1Q7L9B9 569 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 NEK8Q86SG6 692 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 NOSTRINQ8IVI9 506 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 TNFRSF25Q93038 417 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 ABHD8Q96I13 439 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 MXRA8Q9BRK3 442 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 JADE2Q9NQC1 790 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 LCTP09848 1927 aa20.37■□□□□ 0.85
SSSCA1-201ENST00000309328 CYP3A7-CYP3A51PA0A087WV96 503 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 DTNBO60941 627 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 CYP3A7P24462 503 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 FOSBP53539 338 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 NR5A1Q13285 461 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 ORC2Q13416 577 aaPredicted RBP20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 NEDD9Q14511 834 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 MTFR1Q15390 333 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 BRDTQ58F21 947 aaPredicted RBP20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 OXER1Q8TDS5 423 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 PGBD1Q96JS3 809 aa20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 DAXXQ9UER7 740 aaPredicted RBP20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
SSSCA1-201ENST00000309328 SPATA31C2B4DYI2 1134 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 MEIS1O00470 390 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 TXNP10599 105 aaKnown RBP20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 ADCYAP1R1P41586 468 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 GJA8P48165 433 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 PPP4R3AQ6IN85 833 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 CCDC62Q6P9F0 684 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 ANKLE1Q8NAG6 615 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 ARRDC4Q8NCT1 418 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 EMID1Q96A84 441 aaPredicted RBP20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 DEFB118Q96PH6 123 aa20.35■□□□□ 0.85
SSSCA1-201ENST00000309328 RGS20O76081 388 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 SGPL1O95470 568 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 ITGB5P18084 799 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 SYT1P21579 422 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 NKX3-2P78367 333 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 INF2Q27J81 1249 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 Q4G0T1 1027 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 BRAPQ7Z569 592 aa20.34■□□□□ 0.85
SSSCA1-201ENST00000309328 RNF180Q86T96 592 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms