RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TADA3O75528 432 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 STMN1P16949 149 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 PI16Q6UXB8 463 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 CCDC68Q9H2F9 335 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.66■□□□□ 0.26
LEMD3-201ENST00000308330 ATICP31939 592 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 RCN1Q15293 331 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 ZNF174Q15697 407 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 TRMT2AQ8IZ69 625 aaKnown RBP16.65■□□□□ 0.26
LEMD3-201ENST00000308330 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 TLR7Q9NYK1 1049 aaKnown RBP16.65■□□□□ 0.26
LEMD3-201ENST00000308330 PRELID1Q9Y255 219 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 E7EWF7 191 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 SNAP23O00161 211 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 ARPC4P59998 168 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 CCDC62Q6P9F0 684 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 LONP2Q86WA8 852 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 SH3BP5O60239 455 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 FGAP02671 866 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 PHKBQ93100 1093 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 GINS2Q9Y248 185 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 RBM47A0AV96 593 aaKnown RBP16.65■□□□□ 0.26
LEMD3-201ENST00000308330 EIF3HO15372 352 aaKnown RBP eCLIP16.65■□□□□ 0.265e-11■■■□□ 14.9
LEMD3-201ENST00000308330 NOP14P78316 857 aaKnown RBP16.65■□□□□ 0.26
LEMD3-201ENST00000308330 NFIXQ14938 502 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 SH3GL1Q99961 368 aa16.65■□□□□ 0.26
LEMD3-201ENST00000308330 CCDC189A1A4V9 331 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 DTNBO60941 627 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 HSPD1P10809 573 aaKnown RBP16.64■□□□□ 0.25
LEMD3-201ENST00000308330 MTX1Q13505 466 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 HS2ST1Q7LGA3 356 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.64■□□□□ 0.25
LEMD3-201ENST00000308330 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 ATP5DP30049 168 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 CTNNA1P35221 906 aaKnown RBP16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SERPINB4P48594 390 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 PRR16Q569H4 304 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 CCDC13Q8IYE1 715 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 DESI2Q9BSY9 194 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 GLT8D2Q9H1C3 349 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 STOML1Q9UBI4 398 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 ARHGEF40Q8TER5 1519 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 USP27XA6NNY8 438 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SMAPO00193 183 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SERPINB3P29508 390 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 GGCXP38435 758 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 TSHZ1Q6ZSZ6 1077 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 RMND1Q9NWS8 449 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 DLGAP2Q9P1A6 1054 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SLC4A7Q9Y6M7 1214 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 TARSL2A2RTX5 802 aaKnown RBP16.64■□□□□ 0.25
LEMD3-201ENST00000308330 NOP56O00567 594 aaKnown RBP16.64■□□□□ 0.25
LEMD3-201ENST00000308330 PDE5AO76074 875 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 SPAG1Q07617 926 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 ALS2CLQ60I27 953 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 GADL1Q6ZQY3 521 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 BRAPQ7Z569 592 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 ATL2Q8NHH9 583 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 MYO1AQ9UBC5 1043 aa16.64■□□□□ 0.25
LEMD3-201ENST00000308330 P4HA2O15460 535 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 PIK3AP1Q6ZUJ8 805 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 NLRP14Q86W24 1093 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 DIS3L2Q8IYB7 885 aaKnown RBP16.63■□□□□ 0.25
LEMD3-201ENST00000308330 GORASP1Q9BQQ3 440 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 NOD2Q9HC29 1040 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 FAM13AO94988 1023 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 FYB2Q5VWT5 728 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 CLEC17AQ6ZS10 378 aa16.63■□□□□ 0.25
LEMD3-201ENST00000308330 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
LEMD3-201ENST00000308330 ENAHQ8N8S7 591 aaPredicted RBP16.63■□□□□ 0.25
LEMD3-201ENST00000308330 VWA3AA6NCI4 1184 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 IMPDH2P12268 514 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 GUCY2FP51841 1108 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 RAD23BP54727 409 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 PPP2R5BQ15173 497 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 CCND1P24385 295 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 CELF1Q92879 486 aaKnown RBP16.62■□□□□ 0.25
LEMD3-201ENST00000308330 LMNAP02545 664 aaKnown RBP16.62■□□□□ 0.25
LEMD3-201ENST00000308330 TMTC1Q8IUR5 882 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 ZNF521Q96K83 1311 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 IRAK1P51617 712 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 ABCB5Q2M3G0 1257 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
LEMD3-201ENST00000308330 LZTS1Q9Y250 596 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms