RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 ELAC2Q9BQ52 826 aaKnown RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 STMN4Q9H169 189 aaPredicted RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 ZBTB21Q9ULJ3 1066 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 FAM13AO94988 1023 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 H2AFZP0C0S5 128 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 H2AFVQ71UI9 128 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 CCDC197Q8NCU1 140 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 MAGOHP61326 146 aaKnown RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 VWA3BQ502W6 1294 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 OTUD6AQ7L8S5 288 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 NEK8Q86SG6 692 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 NLRP14Q86W24 1093 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 MAGOHBQ96A72 148 aaKnown RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 IFT74Q96LB3 600 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
PDGFD-201ENST00000302251 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
PDGFD-201ENST00000302251 COL15A1P39059 1388 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 MEFVO15553 781 aaPredicted RBP13.31□□□□□ -0.28
PDGFD-201ENST00000302251 TMOD1P28289 359 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 MAN2A1Q16706 1144 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 FAM26FQ5R3K3 315 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 HDAC7Q8WUI4 952 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 CCT8L2Q96SF2 557 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 GCNT3O95395 438 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 CYP2D6P10635 497 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 EPB41P11171 864 aaKnown RBP13.31□□□□□ -0.28
PDGFD-201ENST00000302251 HSPA2P54652 639 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 MXRA7P84157 204 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 ARHGEF2Q92974 986 aaKnown RBP13.31□□□□□ -0.28
PDGFD-201ENST00000302251 GJA10Q969M2 543 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 GOLPH3Q9H4A6 298 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 THAP9Q9H5L6 903 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 KLC4Q9NSK0 619 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 ARMCX3Q9UH62 379 aaPredicted RBP13.31□□□□□ -0.28
PDGFD-201ENST00000302251 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 SNX12Q9UMY4 172 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 DPYDQ12882 1025 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 DDX42Q86XP3 938 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDGFD-201ENST00000302251 MSANTD4Q8NCY6 345 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 ZIM3Q96PE6 472 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 RBM12Q9NTZ6 932 aaKnown RBP13.31□□□□□ -0.28
PDGFD-201ENST00000302251 PANK4Q9NVE7 773 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 COL18A1P39060 1754 aa13.31□□□□□ -0.28
PDGFD-201ENST00000302251 ALS2Q96Q42 1657 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 PPP1R3GB7ZBB8 358 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 SLC1A4P43007 532 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 ZNF131P52739 623 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 UAP1Q16222 522 aaPredicted RBP13.3□□□□□ -0.28
PDGFD-201ENST00000302251 SEL1L2Q5TEA6 688 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 ANKRD40Q6AI12 368 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 PCDHA12Q9UN75 941 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 PPP1R37O75864 691 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 USP17L8P0C7I0 530 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 XRCC5P13010 732 aaKnown RBP13.3□□□□□ -0.28
PDGFD-201ENST00000302251 RPL13P26373 211 aaKnown RBP13.3□□□□□ -0.28
PDGFD-201ENST00000302251 SLC8A1P32418 973 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 STX2P32856 288 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 SPDYE3A6NKU9 549 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 CYP4A11Q02928 519 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 LARP4BQ92615 738 aaKnown RBP13.3□□□□□ -0.28
PDGFD-201ENST00000302251 CUL5Q93034 780 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 KLHL29Q96CT2 875 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 PCDHA4Q9UN74 947 aa13.3□□□□□ -0.28
PDGFD-201ENST00000302251 PRPHP41219 470 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 STAT1P42224 750 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 MYO1EQ12965 1108 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 USP17L2Q6R6M4 530 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 PRM3Q9NNZ6 103 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 LIMA1Q9UHB6 759 aaKnown RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 TBK1Q9UHD2 729 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 HEG1Q9ULI3 1381 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 ANO9A1A5B4 782 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 GMNCA6NCL1 334 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 CCDC160A6NGH7 325 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 LSP1P33241 339 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 RNPC3Q96LT9 517 aaKnown RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 TRIM7Q9C029 511 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 CLGNO14967 610 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 ZNF18P17022 549 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 FKBP3Q00688 224 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms