RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CYP2C9P11712 490 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 PDIA4P13667 645 aaKnown RBP24.32■■□□□ 1.48
SMCO4-201ENST00000298966 ANTXR2P58335 489 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 IQCA1Q86XH1 822 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 TCEANC2Q96MN5 208 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 POLR3EQ9NVU0 708 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 ZSWIM5Q9P217 1185 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 TPCN1Q9ULQ1 816 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 ZNF536O15090 1300 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 TNKSO95271 1327 aa24.32■■□□□ 1.48
SMCO4-201ENST00000298966 SH2B2O14492 632 aaPredicted RBP24.31■■□□□ 1.48
SMCO4-201ENST00000298966 RCAN1P53805 252 aa24.31■■□□□ 1.48
SMCO4-201ENST00000298966 SGMS1Q86VZ5 419 aa24.31■■□□□ 1.48
SMCO4-201ENST00000298966 NEDD1Q8NHV4 660 aa24.31■■□□□ 1.48
SMCO4-201ENST00000298966 SLC9A7Q96T83 725 aa24.31■■□□□ 1.48
SMCO4-201ENST00000298966 UBAC1Q9BSL1 405 aa24.31■■□□□ 1.48
SMCO4-201ENST00000298966 EPHX3Q9H6B9 360 aa24.31■■□□□ 1.48
SMCO4-201ENST00000298966 TRMT13Q9NUP7 481 aaKnown RBP24.31■■□□□ 1.48
SMCO4-201ENST00000298966 DDX49Q9Y6V7 483 aaKnown RBP24.31■■□□□ 1.48
SMCO4-201ENST00000298966 PLIN4Q96Q06 1357 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 SLC1A4P43007 532 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 ME3Q16798 604 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 RRP12Q5JTH9 1297 aaKnown RBP24.3■■□□□ 1.48
SMCO4-201ENST00000298966 TMEM63BQ5T3F8 832 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 CYB5R4Q7L1T6 521 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 GMCL1Q96IK5 515 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 CYP39A1Q9NYL5 469 aa24.3■■□□□ 1.48
SMCO4-201ENST00000298966 IFIT3O14879 490 aaKnown RBP24.29■■□□□ 1.48
SMCO4-201ENST00000298966 PFKFB2O60825 505 aa24.29■■□□□ 1.48
SMCO4-201ENST00000298966 RFC2P35250 354 aa24.29■■□□□ 1.48
SMCO4-201ENST00000298966 TMEM31Q5JXX7 168 aa24.29■■□□□ 1.48
SMCO4-201ENST00000298966 PHOSPHO2Q8TCD6 241 aa24.29■■□□□ 1.48
SMCO4-201ENST00000298966 IGDCC4Q8TDY8 1250 aa24.29■■□□□ 1.48
SMCO4-201ENST00000298966 ARNTL2Q8WYA1 636 aa24.29■■□□□ 1.48
SMCO4-201ENST00000298966 KIF28PB7ZC32 967 aa24.28■■□□□ 1.48
SMCO4-201ENST00000298966 DHX16O60231 1041 aaKnown RBP24.28■■□□□ 1.48
SMCO4-201ENST00000298966 PLA2G6O60733 806 aa24.28■■□□□ 1.48
SMCO4-201ENST00000298966 COL9A3Q14050 684 aaPredicted RBP24.28■■□□□ 1.48
SMCO4-201ENST00000298966 DUSP28Q4G0W2 176 aa24.28■■□□□ 1.48
SMCO4-201ENST00000298966 MUM1L1Q5H9M0 696 aa24.28■■□□□ 1.48
SMCO4-201ENST00000298966 NSMFQ6X4W1 530 aa24.28■■□□□ 1.48
SMCO4-201ENST00000298966 GTF3C6Q969F1 213 aa24.28■■□□□ 1.48
SMCO4-201ENST00000298966 LLPHQ9BRT6 129 aaKnown RBP24.28■■□□□ 1.48
SMCO4-201ENST00000298966 GPHNQ9NQX3 736 aaPredicted RBP24.28■■□□□ 1.48
SMCO4-201ENST00000298966 EPOPA6NHQ4 379 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 TLL1O43897 1013 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 RANBP6O60518 1105 aaKnown RBP24.27■■□□□ 1.48
SMCO4-201ENST00000298966 MYL3P08590 195 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 CPT1AP50416 773 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 TFAP4Q01664 338 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 FAM47CQ5HY64 1035 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 RETREG2Q8NC44 543 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 MORC4Q8TE76 937 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 HLA-CQ95604 372 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 LRRC2Q9BYS8 371 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 TCP11L1Q9NUJ3 509 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 LCTP09848 1927 aa24.27■■□□□ 1.48
SMCO4-201ENST00000298966 XIRP2A4UGR9 3374 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 SNAP25P60880 206 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 PURAQ00577 322 aaKnown RBP24.26■■□□□ 1.47
SMCO4-201ENST00000298966 TAP1Q03518 808 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 WTAPQ15007 396 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 PPP2R5BQ15173 497 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 PPP4R3BQ5MIZ7 849 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 KRT40Q6A162 431 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 SYNE3Q6ZMZ3 975 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 CHST3Q7LGC8 479 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 MTG1Q9BT17 334 aaPredicted RBP24.26■■□□□ 1.47
SMCO4-201ENST00000298966 WDR11Q9BZH6 1224 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 FTOQ9C0B1 505 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMCO4-201ENST00000298966 ADD3Q9UEY8 706 aaKnown RBP24.26■■□□□ 1.47
SMCO4-201ENST00000298966 CCPG1Q9ULG6 757 aa24.26■■□□□ 1.47
SMCO4-201ENST00000298966 TSPY2A6NKD2 308 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 NUCB2P80303 420 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 APOBRQ0VD83 1088 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 BRDTQ58F21 947 aaPredicted RBP24.25■■□□□ 1.47
SMCO4-201ENST00000298966 RCSD1Q6JBY9 416 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 KCTD1Q719H9 257 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 HERC6Q8IVU3 1022 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 ZSCAN10Q96SZ4 725 aaPredicted RBP24.25■■□□□ 1.47
SMCO4-201ENST00000298966 LY9Q9HBG7 655 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 FOXD4L1Q9NU39 408 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 PRR12Q9ULL5 1215 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 NID2Q14112 1375 aa24.25■■□□□ 1.47
SMCO4-201ENST00000298966 BRWD1Q9NSI6 2320 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 PIEZO1Q92508 2521 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 TANC1Q9C0D5 1861 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 SCN10AQ9Y5Y9 1956 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 KLF18A0A0U1RQI7 1052 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 CCDC69A6NI79 296 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 LARGE1O95461 756 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 PDIA3P30101 505 aaKnown RBP24.24■■□□□ 1.47
SMCO4-201ENST00000298966 CCDC83Q8IWF9 413 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 OR6J1Q8NGC5 347 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 PURBQ96QR8 312 aaKnown RBP24.24■■□□□ 1.47
SMCO4-201ENST00000298966 SMC3Q9UQE7 1217 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 KIF3AQ9Y496 699 aa24.24■■□□□ 1.47
SMCO4-201ENST00000298966 PITPNM1O00562 1244 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 IQCF3P0C7M6 154 aa24.23■■□□□ 1.47
SMCO4-201ENST00000298966 GRB10Q13322 594 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms