RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ETNPPLQ8TBG4 499 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 SYMPKQ92797 1274 aaKnown RBP27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 PARK7Q99497 189 aaKnown RBP27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 PDCD2LQ9BRP1 358 aa27.87■■■□□ 2.05
GTF2A1-201ENST00000298173 MEIS1O00470 390 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 ZNF76P36508 570 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 TXKP42681 527 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 SYKP43405 635 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 PGM5Q15124 567 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 ZSCAN23Q3MJ62 389 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 CEP55Q53EZ4 464 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 GPRC5AQ8NFJ5 357 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 IL31RAQ8NI17 732 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 CLSTN2Q9H4D0 955 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 MROH8Q9H579 483 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 PFASO15067 1338 aa27.86■■■□□ 2.05
GTF2A1-201ENST00000298173 PDIA5Q14554 519 aa27.85■■■□□ 2.05
GTF2A1-201ENST00000298173 ANKRD35Q8N283 1001 aa27.85■■■□□ 2.05
GTF2A1-201ENST00000298173 AK8Q96MA6 479 aa27.85■■■□□ 2.05
GTF2A1-201ENST00000298173 TECP42680 631 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 MRPS9P82933 396 aaKnown RBP27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 TIGD1Q96MW7 591 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 MXRA8Q9BRK3 442 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 TTC12Q9H892 705 aaPredicted RBP27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 MSH4O15457 936 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 EIF2AK2P19525 551 aaKnown RBP27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 ARHGEF16Q5VV41 709 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 XRRA1Q6P2D8 792 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 SLFN12Q8IYM2 578 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 ANKRD13CQ8N6S4 541 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 NSUN6Q8TEA1 469 aaKnown RBP27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 FAM20AQ96MK3 541 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 NUP62CLQ9H1M0 184 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 UBIAD1Q9Y5Z9 338 aa27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 ZNFX1Q9P2E3 1918 aaKnown RBP27.84■■■□□ 2.05
GTF2A1-201ENST00000298173 KINO60870 393 aaKnown RBP27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 ITGB5P18084 799 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 NIPA1Q7RTP0 329 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 VSIG10LQ86VR7 867 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 IFNL1Q8IU54 200 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 DNERQ8NFT8 737 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 CCSER1Q9C0I3 900 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 PCDHA12Q9UN75 941 aa27.83■■■□□ 2.05
GTF2A1-201ENST00000298173 BCRP11274 1271 aa27.82■■■□□ 2.04
GTF2A1-201ENST00000298173 RBM43Q6ZSC3 357 aaKnown RBP27.82■■■□□ 2.04
GTF2A1-201ENST00000298173 GJA10Q969M2 543 aa27.82■■■□□ 2.04
GTF2A1-201ENST00000298173 PORCNQ9H237 461 aa27.82■■■□□ 2.04
GTF2A1-201ENST00000298173 ADGRA2Q96PE1 1338 aa27.82■■■□□ 2.04
GTF2A1-201ENST00000298173 A0A087X0B3 334 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 NR3C2P08235 984 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 CDC25AP30304 524 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 TM4SF4P48230 202 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 CCNA1P78396 465 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 PLA2G4DQ86XP0 818 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 FAM133AQ8N9E0 248 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 ZFP91Q96JP5 570 aaPredicted RBP27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 POLR2DO15514 142 aaKnown RBP27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 LETM1O95202 739 aaPredicted RBP27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 ZNF445P59923 1031 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 CNTN2Q02246 1040 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 CAMK4Q16566 473 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 TMEM266Q2M3C6 531 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 LONRF3Q496Y0 759 aa27.81■■■□□ 2.04
GTF2A1-201ENST00000298173 ASTN1O14525 1302 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 DNAJC25-GNG10A0A024R161 153 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 PP2D1A8MPX8 630 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 SETQ01105 290 aaPredicted RBP27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 FAM110CQ1W6H9 321 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 IWS1Q96ST2 819 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 ZIC5Q96T25 663 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 PANK2Q9BZ23 570 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 EFCC1Q9HA90 598 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 JADE2Q9NQC1 790 aa27.8■■■□□ 2.04
GTF2A1-201ENST00000298173 MARCH6O60337 910 aa27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 ARP10275 920 aa27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 SPIRE1Q08AE8 756 aa27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 ELOA2Q8IYF1 753 aaPredicted RBP27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 SLC5A5Q92911 643 aa27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 MMTAG2Q9BU76 263 aaKnown RBP27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 RAB34Q9BZG1 259 aa27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 TNMDQ9H2S6 317 aa27.79■■■□□ 2.04
GTF2A1-201ENST00000298173 SREBF2Q12772 1141 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 KRBA2Q6ZNG9 492 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 CREBZFQ9NS37 354 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 LRWD1Q9UFC0 647 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 SYCE3A1L190 88 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 SOWAHBA6NEL2 793 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 RASSF10A6NK89 507 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 POTEB2H3BUK9 544 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 CTAGE5O15320 804 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 MYCLP12524 364 aaPredicted RBP27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 CCND2P30279 289 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 UBA7P41226 1012 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 E2F4Q16254 413 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 CYP4F22Q6NT55 531 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 PDILTQ8N807 584 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 MMP19Q99542 508 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 WDR11Q9BZH6 1224 aa27.78■■■□□ 2.04
GTF2A1-201ENST00000298173 POTEMA6NI47 508 aa27.77■■■□□ 2.04
GTF2A1-201ENST00000298173 ACTN4O43707 911 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms