RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SNX5Q9Y5X3 404 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ATP6V1E1P36543 226 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ZAP70P43403 619 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ARHGDIAP52565 204 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 C2orf54Q08AI8 447 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CNBD1Q8NA66 436 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 FMO2Q99518 471 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 MED23Q9ULK4 1368 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT1P04264 644 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 USH1GQ495M9 461 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 TRIM60Q495X7 471 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ANKRD13CQ8N6S4 541 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 RWDD2AQ9UIY3 292 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CAPN11Q9UMQ6 739 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 PIK3CAP42336 1068 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 DR1Q01658 176 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 THOC5Q13769 683 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 SPARCL1Q14515 664 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 E2F4Q16254 413 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF658Q5TYW1 1059 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 SUPT20HQ8NEM7 779 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 IP6K1Q92551 441 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 SUCLA2Q9P2R7 463 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 TNRQ92752 1358 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 F8W8V4 182 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 XPOTO43592 962 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 POLR2MP0CAP2 368 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CRLF3Q8IUI8 442 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ATP6V0A1Q93050 837 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 FAM89AQ96GI7 184 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CFAP73A6NFT4 308 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 GCKRQ14397 625 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CYP4F22Q6NT55 531 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 RNF207Q6ZRF8 634 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CENPUQ71F23 418 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 ZC3H18Q86VM9 953 aaKnown RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 SESTD1Q86VW0 696 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 GINS2Q9Y248 185 aa9.42□□□□□ -0.9
SCUBE3-201ENST00000274938 CC2D2AQ9P2K1 1620 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 hCG_1984214I3L0E3 225 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 SERPING1P05155 500 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 PTPREP23469 700 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 RAP1GDS1P52306 607 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 WDR75Q8IWA0 830 aaKnown RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF713Q8N859 430 aaPredicted RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 SH3GL3Q99963 347 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 DENND4BO75064 1496 aaPredicted RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 ADCY9O60503 1353 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT4P19013 534 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 HOXC9P31274 260 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 SPOPLQ6IQ16 392 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 C19orf44Q9H6X5 657 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 PODXLO00592 558 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 FBLN1P23142 703 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 POLD1P28340 1107 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 IFRD2Q12894 506 aaPredicted RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF790Q6PG37 636 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 CACTINQ8WUQ7 758 aaKnown RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 GLG1Q92896 1179 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 STAMBPL1Q96FJ0 436 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 ACSBG1Q96GR2 724 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 MMS19Q96T76 1030 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 ZBTB18Q99592 522 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 NRBP2Q9NSY0 501 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT37O76014 449 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 CA4P22748 312 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 IFNA8P32881 189 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 CDC37Q16543 378 aaPredicted RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 TTC25Q96NG3 672 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF233A6NK53 670 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 TMEM232C9JQI7 657 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 TAC1P20366 129 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 TFDP1Q14186 410 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 EP400NLQ6ZTU2 488 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 PITPNM3Q9BZ71 974 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 KDM5BQ9UGL1 1544 aa9.41□□□□□ -0.9
SCUBE3-201ENST00000274938 PNMA6EA0A0J9YXQ4 647 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 NCF2P19878 526 aaPredicted RBP9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 ARL4AP40617 200 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 KLC3Q6P597 504 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 TRMT10CQ7L0Y3 403 aaKnown RBP9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 PCGF5Q86SE9 256 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 GAS2L3Q86XJ1 694 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 LARP4BQ92615 738 aaKnown RBP9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 RPS6KC1Q96S38 1066 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 NDE1Q9NXR1 346 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 USP19O94966 1318 aa9.4□□□□□ -0.9
SCUBE3-201ENST00000274938 ABCC1P33527 1531 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms