RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-201ENST00000269571 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 ARHGEF40Q8TER5 1519 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 H3BQF6 201 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 EXOC3O60645 756 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 EMBQ6PCB8 327 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■□□□ 11.6
ERBB2-201ENST00000269571 GGA1Q9UJY5 639 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-201ENST00000269571 CCDC169A6NNP5 214 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 PDE8BO95263 885 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 IFNB1P01574 187 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 LONP1P36776 959 aaKnown RBP13.2□□□□□ -0.3
ERBB2-201ENST00000269571 CYP2J2P51589 502 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 FAM26FQ5R3K3 315 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 OTUD6AQ7L8S5 288 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
ERBB2-201ENST00000269571 PIH1D3Q9NQM4 214 aaKnown RBP13.2□□□□□ -0.3
ERBB2-201ENST00000269571 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
ERBB2-201ENST00000269571 PTPRMP28827 1452 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 APBA3O96018 575 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 PRCPP42785 496 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 BIRC3Q13489 604 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 LRRC31Q6UY01 552 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 MYCT1Q8N699 235 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 ENGASEQ8NFI3 743 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 RNF217Q8TC41 542 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 GJA10Q969M2 543 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 LRRC1Q9BTT6 524 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 VPS37BQ9H9H4 285 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 RIMBP3CA6NJZ7 1639 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 RIMBP3BA6NNM3 1639 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 CAMSAP1Q5T5Y3 1602 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 RIMBP3Q9UFD9 1639 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
ERBB2-201ENST00000269571 CAND2O75155 1236 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 TFRCP02786 760 aaKnown RBP13.19□□□□□ -0.3
ERBB2-201ENST00000269571 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
ERBB2-201ENST00000269571 SWT1Q5T5J6 900 aaKnown RBP13.19□□□□□ -0.3
ERBB2-201ENST00000269571 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 DDX12PQ92771 950 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
ERBB2-201ENST00000269571 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 ADCY7P51828 1080 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 MLXIPLQ9NP71 852 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 TBK1Q9UHD2 729 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
ERBB2-201ENST00000269571 SNUPNO95149 360 aaKnown RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 STAMBPO95630 424 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 BAG2O95816 211 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 LRRC7Q96NW7 1537 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 HEG1Q9ULI3 1381 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 FAM205CA6NFA0 338 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 HAUS3Q68CZ6 603 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 CCDC13Q8IYE1 715 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 CFBP00751 764 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 HSPA1LP34931 641 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-201ENST00000269571 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 DAAM1Q9Y4D1 1078 aa13.18□□□□□ -0.3
ERBB2-201ENST00000269571 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PPFIA2O75334 1257 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 CIB2O75838 187 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 SUN1O94901 812 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 CCNE1P24864 410 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 DHTKD1Q96HY7 919 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PP2D1A8MPX8 630 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 KRT14P02533 472 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PLCG1P19174 1290 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 ADCY8P40145 1251 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 SEC24CP53992 1094 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 CUL3Q13618 768 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 MESDQ14696 234 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
ERBB2-201ENST00000269571 MB21D2Q8IYB1 491 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-201ENST00000269571 GDAP1Q8TB36 358 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms