RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 COL25A1Q9BXS0 654 aaPredicted RBP26.78■■□□□ 1.88
HMG20B-201ENST00000262949 SCN10AQ9Y5Y9 1956 aa26.78■■□□□ 1.88
HMG20B-201ENST00000262949 E7EWF7 191 aa26.77■■□□□ 1.88
HMG20B-201ENST00000262949 SGSM2O43147 1006 aa26.77■■□□□ 1.88
HMG20B-201ENST00000262949 LAMC2Q13753 1193 aa26.77■■□□□ 1.88
HMG20B-201ENST00000262949 CATIPQ7Z7H3 387 aa26.77■■□□□ 1.88
HMG20B-201ENST00000262949 PPP1R13LQ8WUF5 828 aa26.77■■□□□ 1.88
HMG20B-201ENST00000262949 NKX2-4Q9H2Z4 354 aa26.77■■□□□ 1.88
HMG20B-201ENST00000262949 DDX41Q9UJV9 622 aaKnown RBP26.77■■□□□ 1.88
HMG20B-201ENST00000262949 MYCLP12524 364 aaPredicted RBP26.76■■□□□ 1.87
HMG20B-201ENST00000262949 ATP2A2P16615 1042 aaKnown RBP26.76■■□□□ 1.87
HMG20B-201ENST00000262949 PTGISQ16647 500 aa26.76■■□□□ 1.87
HMG20B-201ENST00000262949 KCNV1Q6PIU1 500 aa26.76■■□□□ 1.87
HMG20B-201ENST00000262949 KATNAL1Q9BW62 490 aa26.76■■□□□ 1.87
HMG20B-201ENST00000262949 FTOQ9C0B1 505 aaKnown RBP eCLIP26.76■■□□□ 1.87
HMG20B-201ENST00000262949 PRDM12Q9H4Q4 367 aa26.76■■□□□ 1.87
HMG20B-201ENST00000262949 GCOM1H8Y6P7 765 aaPredicted RBP26.75■■□□□ 1.87
HMG20B-201ENST00000262949 POLR2MP0CAP2 368 aa26.75■■□□□ 1.87
HMG20B-201ENST00000262949 GHRHRQ02643 423 aa26.75■■□□□ 1.87
HMG20B-201ENST00000262949 TMEM67Q5HYA8 995 aa26.75■■□□□ 1.87
HMG20B-201ENST00000262949 DHX37Q8IY37 1157 aaKnown RBP26.75■■□□□ 1.87
HMG20B-201ENST00000262949 EMID1Q96A84 441 aaPredicted RBP26.75■■□□□ 1.87
HMG20B-201ENST00000262949 PIGSQ96S52 555 aa26.75■■□□□ 1.87
HMG20B-201ENST00000262949 RIOX1Q9H6W3 641 aa26.75■■□□□ 1.87
HMG20B-201ENST00000262949 OPLAHO14841 1288 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 PPP1R11O60927 126 aaPredicted RBP26.74■■□□□ 1.87
HMG20B-201ENST00000262949 IQCF3P0C7M6 154 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 HOXA13P31271 388 aaPredicted RBP26.74■■□□□ 1.87
HMG20B-201ENST00000262949 STOX1Q6ZVD7 989 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 CAGE1Q8TC20 777 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 PDCD2LQ9BRP1 358 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 PCDHA11Q9Y5I1 949 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 MYO9BQ13459 2157 aa26.74■■□□□ 1.87
HMG20B-201ENST00000262949 PNMA6FA0A0J9YX94 578 aa26.73■■□□□ 1.87
HMG20B-201ENST00000262949 RABGGTBP53611 331 aa26.73■■□□□ 1.87
HMG20B-201ENST00000262949 SESTD1Q86VW0 696 aa26.73■■□□□ 1.87
HMG20B-201ENST00000262949 C7orf31Q8N865 590 aa26.73■■□□□ 1.87
HMG20B-201ENST00000262949 PPTC7Q8NI37 304 aa26.73■■□□□ 1.87
HMG20B-201ENST00000262949 CCND2P30279 289 aa26.72■■□□□ 1.87
HMG20B-201ENST00000262949 TROAPQ12815 778 aa26.72■■□□□ 1.87
HMG20B-201ENST00000262949 PGM5Q15124 567 aa26.72■■□□□ 1.87
HMG20B-201ENST00000262949 PPP2R2DQ66LE6 453 aa26.72■■□□□ 1.87
HMG20B-201ENST00000262949 CASC1Q6TDU7 716 aa26.72■■□□□ 1.87
HMG20B-201ENST00000262949 MAP4K1Q92918 833 aa26.72■■□□□ 1.87
HMG20B-201ENST00000262949 YBX2Q9Y2T7 364 aaKnown RBP26.72■■□□□ 1.87
HMG20B-201ENST00000262949 KIAA1217Q5T5P2 1943 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 TGFB3P10600 412 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 IGFBP4P22692 258 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 VSIG10LQ86VR7 867 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 FCHSD1Q86WN1 690 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 AFAP1L1Q8TED9 768 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 PPM1EQ8WY54 764 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 KAT2BQ92831 832 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 ALG1Q9BT22 464 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 SENP2Q9HC62 589 aa26.71■■□□□ 1.87
HMG20B-201ENST00000262949 RBM8AQ9Y5S9 174 aaKnown RBP26.71■■□□□ 1.87
HMG20B-201ENST00000262949 PSEN2P49810 448 aa26.7■■□□□ 1.86
HMG20B-201ENST00000262949 GDF6Q6KF10 455 aaPredicted RBP26.7■■□□□ 1.86
HMG20B-201ENST00000262949 CTCFLQ8NI51 663 aaPredicted RBP26.7■■□□□ 1.86
HMG20B-201ENST00000262949 SYMPKQ92797 1274 aaKnown RBP26.7■■□□□ 1.86
HMG20B-201ENST00000262949 VWCEQ96DN2 955 aa26.7■■□□□ 1.86
HMG20B-201ENST00000262949 SLC9A7Q96T83 725 aa26.7■■□□□ 1.86
HMG20B-201ENST00000262949 EYSQ5T1H1 3165 aa26.7■■□□□ 1.86
HMG20B-201ENST00000262949 KIF28PB7ZC32 967 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 PPFIA4O75335 1185 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 PARNO95453 639 aaKnown RBP26.69■■□□□ 1.86
HMG20B-201ENST00000262949 KIF5BP33176 963 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 MFSD10Q14728 455 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 PHOSPHO2Q8TCD6 241 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 SPATA33Q96N06 139 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 HDAC6Q9UBN7 1215 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 GTF2IRD1Q9UHL9 959 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 TAF6LQ9Y6J9 622 aa26.69■■□□□ 1.86
HMG20B-201ENST00000262949 CYTH3O43739 400 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 GGPS1O95749 300 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 KIAA0753Q2KHM9 967 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 GNPTABQ3T906 1256 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 CELF3Q5SZQ8 465 aaKnown RBP26.68■■□□□ 1.86
HMG20B-201ENST00000262949 MYSM1Q5VVJ2 828 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 MB21D2Q8IYB1 491 aaPredicted RBP26.68■■□□□ 1.86
HMG20B-201ENST00000262949 IGDCC4Q8TDY8 1250 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 PIBF1Q8WXW3 757 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 MLXIPQ9HAP2 919 aa26.68■■□□□ 1.86
HMG20B-201ENST00000262949 DDAH1O94760 285 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 BAIAP3O94812 1187 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 F2P00734 622 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 ZNF286BP0CG31 522 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 SELPP16109 830 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 KCNJ6P48051 423 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 SLC35G1Q2M3R5 365 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 NFXL1Q6ZNB6 911 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 TMTC2Q8N394 836 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 USP38Q8NB14 1042 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 CUL5Q93034 780 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 RRP36Q96EU6 259 aaKnown RBP26.67■■□□□ 1.86
HMG20B-201ENST00000262949 MAP3K14Q99558 947 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 MTA3Q9BTC8 594 aa26.67■■□□□ 1.86
HMG20B-201ENST00000262949 SEC63Q9UGP8 760 aaKnown RBP26.67■■□□□ 1.86
HMG20B-201ENST00000262949 BAZ2BQ9UIF8 2168 aaKnown RBP26.67■■□□□ 1.86
HMG20B-201ENST00000262949 RGS20O76081 388 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms