RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZNF576Q9H609 170 aa22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 RIOX1Q9H6W3 641 aa22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 DDX41Q9UJV9 622 aaKnown RBP22.08■■□□□ 1.12
TM6SF1-201ENST00000258909 GBF1Q92538 1859 aa22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 EIF3JO75822 258 aaKnown RBP22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 MMP3P08254 477 aa22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 NFRKBQ6P4R8 1299 aa22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 SKAP1Q86WV1 359 aa22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 MB21D2Q8IYB1 491 aaPredicted RBP22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 IGDCC4Q8TDY8 1250 aa22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 ZFP91Q96JP5 570 aaPredicted RBP22.07■■□□□ 1.12
TM6SF1-201ENST00000258909 SORBS3O60504 671 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 GHRHRQ02643 423 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 DEFB128Q7Z7B8 93 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 CATIPQ7Z7H3 387 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 RPUSD2Q8IZ73 545 aaKnown RBP22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 IL31RAQ8NI17 732 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 PDCD2LQ9BRP1 358 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 MYL10Q9BUA6 226 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 MRVI1Q9Y6F6 885 aa22.06■■□□□ 1.12
TM6SF1-201ENST00000258909 COL9A3Q14050 684 aaPredicted RBP22.05■■□□□ 1.12
TM6SF1-201ENST00000258909 MTIF3Q9H2K0 278 aaKnown RBP22.05■■□□□ 1.12
TM6SF1-201ENST00000258909 VCANP13611 3396 aa22.05■■□□□ 1.12
TM6SF1-201ENST00000258909 RGS20O76081 388 aa22.04■■□□□ 1.12
TM6SF1-201ENST00000258909 TRIP12Q14669 1992 aaPredicted RBP22.04■■□□□ 1.12
TM6SF1-201ENST00000258909 FCHSD1Q86WN1 690 aa22.04■■□□□ 1.12
TM6SF1-201ENST00000258909 KAT2BQ92831 832 aa22.04■■□□□ 1.12
TM6SF1-201ENST00000258909 LSG1Q9H089 658 aaKnown RBP22.04■■□□□ 1.12
TM6SF1-201ENST00000258909 NOD1Q9Y239 953 aa22.04■■□□□ 1.12
TM6SF1-201ENST00000258909 PNMA6FA0A0J9YX94 578 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 ZBBXA8MT70 800 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 GCOM1H8Y6P7 765 aaPredicted RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 POLR2MP0CAP2 368 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 CASTP20810 708 aaKnown RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 PGM5Q15124 567 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 LY9Q9HBG7 655 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 RABGGTBP53611 331 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 PTPN11Q06124 597 aaPredicted RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 PTGISQ16647 500 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 GDF6Q6KF10 455 aaPredicted RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 VSIG10LQ86VR7 867 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 DHX37Q8IY37 1157 aaKnown RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 ESYT1Q9BSJ8 1104 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 NKX2-4Q9H2Z4 354 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 MAP3K20Q9NYL2 800 aaKnown RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 MSRAQ9UJ68 235 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 YBX2Q9Y2T7 364 aaKnown RBP22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 SLC4A7Q9Y6M7 1214 aa22.03■■□□□ 1.12
TM6SF1-201ENST00000258909 CHD7Q9P2D1 2997 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 PRC1O43663 620 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 DGKDQ16760 1214 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 ZNF654Q8IZM8 581 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 RETREG2Q8NC44 543 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 GPKOWQ92917 476 aaPredicted RBP eCLIP22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 ALG1Q9BT22 464 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 PRDM12Q9H4Q4 367 aa22.02■■□□□ 1.12
TM6SF1-201ENST00000258909 TET1Q8NFU7 2136 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 RBAK-RBAKDNI3L0D1 243 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 SLC27A2O14975 620 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 IQCF3P0C7M6 154 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 ZNF286BP0CG31 522 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 MYOGP15173 224 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 LAMC2Q13753 1193 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 RAB30Q15771 203 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 CASC1Q6TDU7 716 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 EMID1Q96A84 441 aaPredicted RBP22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 CTAGE1Q96RT6 745 aa22.01■■□□□ 1.11
TM6SF1-201ENST00000258909 TANC1Q9C0D5 1861 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 RXRAP19793 462 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 SP2Q02086 613 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 TRAF1Q13077 416 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 NFXL1Q6ZNB6 911 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 RAB11FIP4Q86YS3 637 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 SAMD3Q8N6K7 520 aa22■■□□□ 1.11
TM6SF1-201ENST00000258909 CTCFLQ8NI51 663 aaPredicted RBP22■■□□□ 1.11
TM6SF1-201ENST00000258909 PITPNM1O00562 1244 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 GGPS1O95749 300 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 CCND2P30279 289 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 MCM5P33992 734 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 PSEN2P49810 448 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 BFSP2Q13515 415 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 MYSM1Q5VVJ2 828 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 CMTR1Q8N1G2 835 aaKnown RBP21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 PPTC7Q8NI37 304 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 LRRC2Q9BYS8 371 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 FTOQ9C0B1 505 aaKnown RBP eCLIP21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 ANO2Q9NQ90 1003 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 HDAC6Q9UBN7 1215 aa21.99■■□□□ 1.11
TM6SF1-201ENST00000258909 SH2B2O14492 632 aaPredicted RBP21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 DDAH1O94760 285 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 PLEKHA8P1O95397 391 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 PFKMP08237 780 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 MFSD10Q14728 455 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 HSDL1Q3SXM5 330 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 CELF3Q5SZQ8 465 aaKnown RBP21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 CREB3L3Q68CJ9 461 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 SESTD1Q86VW0 696 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 C7orf31Q8N865 590 aa21.98■■□□□ 1.11
TM6SF1-201ENST00000258909 USP38Q8NB14 1042 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms