RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CYBAP13498 195 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 ELNP15502 786 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 CYP3A7P24462 503 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 PDE4DQ08499 809 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 TBCKQ8TEA7 893 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 MBOAT7Q96N66 472 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 UBIAD1Q9Y5Z9 338 aa16.09■□□□□ 0.17
VPS25-201ENST00000253794 RGS20O76081 388 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 ZNF865P0CJ78 1059 aaPredicted RBP16.08■□□□□ 0.16
VPS25-201ENST00000253794 ICAM3P32942 547 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 CYP2C19P33261 490 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 BRAPQ7Z569 592 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 ARMC5Q96C12 935 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 GPRASP2Q96D09 838 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
VPS25-201ENST00000253794 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 FAM205CA6NFA0 338 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 MEIS1O00470 390 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 MAFGO15525 162 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 INHAP05111 366 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 UBXN2AP68543 259 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 CACNB2Q08289 660 aaPredicted RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 RESTQ13127 1097 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 ACVR2BQ13705 512 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 INF2Q27J81 1249 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 CEP55Q53EZ4 464 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 PPP4R3AQ6IN85 833 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 TAPT1Q6NXT6 567 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 MXRA8Q9BRK3 442 aa16.07■□□□□ 0.16
VPS25-201ENST00000253794 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
VPS25-201ENST00000253794 BRD1O95696 1058 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 ZSCAN22P10073 491 aaPredicted RBP16.06■□□□□ 0.16
VPS25-201ENST00000253794 TGFB3P10600 412 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
VPS25-201ENST00000253794 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
VPS25-201ENST00000253794 ITGB5P18084 799 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 TRIM32Q13049 653 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
VPS25-201ENST00000253794 GNPTABQ3T906 1256 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 SLC9C1Q4G0N8 1177 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 Q4G0T1 1027 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 TRPV1Q8NER1 839 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 LENG9Q96B70 501 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
VPS25-201ENST00000253794 JADE2Q9NQC1 790 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 CENPFP49454 3210 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
VPS25-201ENST00000253794 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 FAM86B1E9PN63 330 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 FIBPO43427 364 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 FAM86B2P0C5J1 330 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
VPS25-201ENST00000253794 RILPL1Q5EBL4 403 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 MCTP1Q6DN14 999 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 CCDC62Q6P9F0 684 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 FBXO16Q8IX29 292 aaPredicted RBP16.05■□□□□ 0.16
VPS25-201ENST00000253794 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 CDHR1Q96JP9 859 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 MCOLN1Q9GZU1 580 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 DAXXQ9UER7 740 aaPredicted RBP16.05■□□□□ 0.16
VPS25-201ENST00000253794 CIZ1Q9ULV3 898 aaPredicted RBP16.05■□□□□ 0.16
VPS25-201ENST00000253794 MCM3APO60318 1980 aa16.05■□□□□ 0.16
VPS25-201ENST00000253794 SEPT4O43236 478 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
VPS25-201ENST00000253794 SEMA3FQ13275 785 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 PKP1Q13835 747 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 MYSM1Q5VVJ2 828 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 IQSEC1Q6DN90 963 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 SENP7Q9BQF6 1050 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
VPS25-201ENST00000253794 ZDHHC9Q9Y397 364 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 KIAA1217Q5T5P2 1943 aa16.04■□□□□ 0.16
VPS25-201ENST00000253794 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
VPS25-201ENST00000253794 TDP2O95551 362 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 F13A1P00488 732 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 AKR1A1P14550 325 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 NKX3-2P78367 333 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 MTMR1Q13613 665 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 DUSP28Q4G0W2 176 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 PRAMEF19Q5SWL8 479 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 CYP2W1Q8TAV3 490 aa16.03■□□□□ 0.16
VPS25-201ENST00000253794 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
VPS25-201ENST00000253794 PDGFCQ9NRA1 345 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms