RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MYMKA6NI61 221 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 MOCS3O95396 460 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 ATP2B4P23634 1241 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 HNRNPH3P31942 346 aaKnown RBP19.19■□□□□ 0.66
USB1-201ENST00000219281 GGCXP38435 758 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 IQCEQ6IPM2 695 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 DYMQ7RTS9 669 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 CREG2Q8IUH2 290 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 C10orf67Q8IYJ2 551 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 CRACR2AQ9BSW2 395 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 SH2D4AQ9H788 454 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 MMRN2Q9H8L6 949 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 BLOC1S4Q9NUP1 217 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 GGA1Q9UJY5 639 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 BRWD3Q6RI45 1802 aa19.19■□□□□ 0.66
USB1-201ENST00000219281 IL1R1P14778 569 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 EIF4A3P38919 411 aaKnown RBP19.18■□□□□ 0.66
USB1-201ENST00000219281 KIF11P52732 1056 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 DEF6Q9H4E7 631 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 TBC1D16Q8TBP0 767 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 IQCDQ96DY2 449 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 UBA5Q9GZZ9 404 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
USB1-201ENST00000219281 ERCC3P19447 782 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 EZH2Q15910 746 aaKnown RBP19.17■□□□□ 0.66
USB1-201ENST00000219281 CCDC70Q6NSX1 233 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 UNC13DQ70J99 1090 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 REXO1Q8N1G1 1221 aaKnown RBP19.17■□□□□ 0.66
USB1-201ENST00000219281 PNMA5Q96PV4 448 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 MYH1P12882 1939 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 LDHCP07864 332 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 CALCRLQ16602 461 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 MAN2A1Q16706 1144 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 C16orf86Q6ZW13 317 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 RRAGAQ7L523 313 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 MMGT1Q8N4V1 131 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 NEDD1Q8NHV4 660 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 CDK5RAP3Q96JB5 506 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
USB1-201ENST00000219281 RTFDC1Q9BY42 306 aaPredicted RBP19.17■□□□□ 0.66
USB1-201ENST00000219281 LRRC53A6NM62 1247 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 AGPSO00116 658 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 AKR1B10O60218 316 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 BTDP43251 543 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 SLC20A2Q08357 652 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 HDAC7Q8WUI4 952 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 LARP4BQ92615 738 aaKnown RBP19.16■□□□□ 0.66
USB1-201ENST00000219281 MTMR9Q96QG7 549 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 LRRC1Q9BTT6 524 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 RASSF4Q9H2L5 321 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 SNED1Q8TER0 1413 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 PVALEFA0A1B0GWK0 134 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 USP17L5A8MUK1 530 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 MATR3P43243 847 aaKnown RBP eCLIP19.16■□□□□ 0.662e-10■■■□□ 19.1
USB1-201ENST00000219281 MRPS25P82663 173 aaKnown RBP19.16■□□□□ 0.66
USB1-201ENST00000219281 NFRKBQ6P4R8 1299 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.16■□□□□ 0.66
USB1-201ENST00000219281 CEP95Q96GE4 821 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 PSMB7Q99436 277 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 PLEKHA4Q9H4M7 779 aa19.16■□□□□ 0.66
USB1-201ENST00000219281 SLC37A4O43826 429 aa19.15■□□□□ 0.66
USB1-201ENST00000219281 AENQ8WTP8 325 aaKnown RBP19.15■□□□□ 0.66
USB1-201ENST00000219281 OSBPL9Q96SU4 736 aa19.15■□□□□ 0.66
USB1-201ENST00000219281 SMARCAL1Q9NZC9 954 aa19.15■□□□□ 0.66
USB1-201ENST00000219281 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
USB1-201ENST00000219281 RSPH14Q9UHP6 348 aa19.15■□□□□ 0.66
USB1-201ENST00000219281 FAM184BQ9ULE4 1060 aa19.15■□□□□ 0.66
USB1-201ENST00000219281 LCA5LO95447 670 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 TDP2O95551 362 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 CXCR5P32302 372 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 LRRC41Q15345 812 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 CCDC84Q86UT8 332 aaPredicted RBP19.14■□□□□ 0.66
USB1-201ENST00000219281 TEX11Q8IYF3 940 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 GUF1Q8N442 669 aaKnown RBP19.14■□□□□ 0.66
USB1-201ENST00000219281 SPATA4Q8NEY3 305 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 BBXQ8WY36 941 aaPredicted RBP19.14■□□□□ 0.66
USB1-201ENST00000219281 COA7Q96BR5 231 aa19.14■□□□□ 0.66
USB1-201ENST00000219281 DMGDHQ9UI17 866 aaKnown RBP19.14■□□□□ 0.66
USB1-201ENST00000219281 FRMPD2Q68DX3 1309 aaPredicted RBP19.14■□□□□ 0.65
USB1-201ENST00000219281 POTEMA6NI47 508 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 FGFR1OPO95684 399 aaKnown RBP19.14■□□□□ 0.65
USB1-201ENST00000219281 PRLRP16471 622 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 MAGEA1P43355 309 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 ORC2Q13416 577 aaPredicted RBP19.14■□□□□ 0.65
USB1-201ENST00000219281 ZNF572Q7Z3I7 529 aaPredicted RBP19.14■□□□□ 0.65
USB1-201ENST00000219281 ANKRD13CQ8N6S4 541 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 ALS2CR12Q96Q35 445 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 NUDT12Q9BQG2 462 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 TRIM34Q9BYJ4 488 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 EHD2Q9NZN4 543 aa19.14■□□□□ 0.65
USB1-201ENST00000219281 GOLGA6BA6NDN3 693 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 NCK2O43639 380 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 FXR2P51116 673 aaKnown RBP eCLIP19.13■□□□□ 0.65
USB1-201ENST00000219281 SLC7A5Q01650 507 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 TMEM266Q2M3C6 531 aa19.13■□□□□ 0.65
USB1-201ENST00000219281 SND1Q7KZF4 910 aaKnown RBP eCLIP19.13■□□□□ 0.65
USB1-201ENST00000219281 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
USB1-201ENST00000219281 CCDC155Q8N6L0 562 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms