RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 LEO1Q8WVC0 666 aaPredicted RBP11.3□□□□□ -0.6
RTCB-201ENST00000216038 GJA10Q969M2 543 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 PXMP2Q9NR77 195 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 RTEL1Q9NZ71 1219 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 CCDC39Q9UFE4 941 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 PFASO15067 1338 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 SLC37A4O43826 429 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 PRPF40AO75400 957 aaKnown RBP11.29□□□□□ -0.6
RTCB-201ENST00000216038 ADORA2AP29274 412 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 GTF2F1P35269 517 aaKnown RBP eCLIP11.29□□□□□ -0.6
RTCB-201ENST00000216038 STK38Q15208 465 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 ARHGAP39Q9C0H5 1083 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 POLR3EQ9NVU0 708 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
RTCB-201ENST00000216038 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 CTGFP29279 349 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 COPB2P35606 906 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 ZNF76P36508 570 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 TRAPPC10P48553 1259 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 PTGDRQ13258 359 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 PGM5Q15124 567 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 PTPAQ15257 358 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 PRR16Q569H4 304 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 POTEDQ86YR6 584 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 MYRIPQ8NFW9 859 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 TMEM60Q9H2L4 133 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 KIAA1217Q5T5P2 1943 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 MGAMO43451 1857 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 COBLO75128 1261 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 MAPK4P31152 587 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 ME1P48163 572 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 PLEKHH3Q7Z736 793 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 NSUN6Q8TEA1 469 aaKnown RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 SCAND2PQ9GZW5 306 aaPredicted RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 EHMT1Q9H9B1 1298 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 DDX25Q9UHL0 483 aaKnown RBP11.28□□□□□ -0.6
RTCB-201ENST00000216038 RPTORQ8N122 1335 aa11.28□□□□□ -0.6
RTCB-201ENST00000216038 SPTLC2O15270 562 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 NEMFO60524 1076 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 GADD45BO75293 160 aaPredicted RBP11.27□□□□□ -0.61
RTCB-201ENST00000216038 NR3C2P08235 984 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 USP11P51784 963 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 MRPS9P82933 396 aaKnown RBP11.27□□□□□ -0.61
RTCB-201ENST00000216038 CAP1Q01518 475 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 GRIN1Q05586 938 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 SLC39A14Q15043 492 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 SAMD3Q8N6K7 520 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 FAM133AQ8N9E0 248 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 CLIC6Q96NY7 704 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 RCOR1Q9UKL0 485 aa11.27□□□□□ -0.61
RTCB-201ENST00000216038 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 TNPO2O14787 897 aaKnown RBP11.26□□□□□ -0.61
RTCB-201ENST00000216038 STRNO43815 780 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 PTPREP23469 700 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
RTCB-201ENST00000216038 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 FGD4Q96M96 766 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 YEATS4O95619 227 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 CYP3A4P08684 503 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 ITGB5P18084 799 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 PSMC4P43686 418 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 LACTBP83111 547 aaPredicted RBP11.26□□□□□ -0.61
RTCB-201ENST00000216038 GRB14Q14449 540 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 PCNX4Q63HM2 1172 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 PPP4R3AQ6IN85 833 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 TRIM47Q96LD4 638 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 PCDHA7Q9UN72 937 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 CEP131Q9UPN4 1083 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 DOCK5Q9H7D0 1870 aa11.26□□□□□ -0.61
RTCB-201ENST00000216038 THSD7BQ9C0I4 1608 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 IGLV3-22A0A075B6J6 115 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 VWA3AA6NCI4 1184 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 ARP10275 920 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 CCND2P30279 289 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 TXKP42681 527 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
RTCB-201ENST00000216038 SP3Q02447 781 aa11.25□□□□□ -0.61
RTCB-201ENST00000216038 IL17AQ16552 155 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms