RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ccdc105Q9D4K7 499 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ndst4Q9EQW8 872 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Cacna1fQ9JIS7 1985 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ttc6G3UYY4 1857 aa11.3□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 GabreA2AMW3 916 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Gm1993A6X8I0 212 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 SlxD3Z347 212 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mroh8E9PYI4 1049 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Usp17ldG5E8G2 545 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Usp17lcG5E8I7 545 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Psmd14O35593 310 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ifnar1P33896 590 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Trim43cP86449 446 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Siah1bQ06985 282 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nsun7Q14AW5 724 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mettl14Q3UIK4 456 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tmtc1Q3UV71 942 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rassf4Q8CB96 322 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Phc3Q8CHP6 981 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Lrrc41Q8K1C9 807 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Eif3cQ8R1B4 911 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Plagl2Q925T4 496 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tpcn1Q9EQJ0 817 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 NynrinQ5DTZ0 1840 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Lmnb1P14733 588 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pth1rP41593 591 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pcif1P59114 706 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Snap25P60879 206 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ncf1Q09014 390 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 EregQ61521 162 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Swap70Q6A028 585 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mettl25Q6NXH8 597 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rhbdf1Q6PIX5 856 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Snd1Q78PY7 910 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Fbxo11Q7TPD1 930 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ankrd24Q80VM7 985 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pdzph1Q8BGR1 1238 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Vgll2Q8BGW8 322 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Maip1Q8BHE8 291 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 LarsQ8BMJ2 1178 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 NkrfQ8BY02 690 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ddx19bQ8BZY3 494 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rcor2Q8C796 523 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Chrna2Q91X60 512 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Smc1bQ920F6 1248 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mettl16Q9CQG2 553 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 RnmtQ9D0L8 465 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ubiad1Q9DC60 336 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Eid1Q9DCR4 169 aa11.29□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Mdh1P14152 334 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Stat3P42227 770 aaKnown RBP11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Psmc2P46471 433 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Pdrg1P59048 133 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Meis3P97368 378 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nt5c2Q3V1L4 560 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nlrp2Q4PLS0 1046 aaKnown RBP11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Islr2Q5RKR3 745 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Q66JV7 365 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tpm4Q6IRU2 248 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 TxlnaQ6PAM1 554 aaKnown RBP11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rexo1Q7TT28 1213 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Armcx3Q8BHS6 379 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Calhm4Q8CE93 315 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Haus2Q9CQS9 234 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 MicalclQ9D5U9 680 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 NapaQ9DB05 295 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Azi2Q9QYP6 405 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Prkab1Q9R078 270 aa11.28□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 AW822073A0A0N4SUK1 652 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Vmn2r79E9Q067 851 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Esr2O08537 530 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Rad51bO35719 350 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 FosP01101 380 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Lrrc4bP0C192 709 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Sema3eP70275 775 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Slc2a13Q3UHK1 637 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tsr1Q5SWD9 803 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ddx3yQ62095 658 aaKnown RBP11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tlr13Q6R5N8 991 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Ctdp1Q7TSG2 960 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Hirip3Q8BLH7 601 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Plcg2Q8CIH5 1265 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Dcaf8Q8N7N5 591 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Atp1a1Q8VDN2 1023 aaKnown RBP11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Dbndd2Q9CRD4 158 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Tmem79Q9D709 391 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 PdclQ9DBX2 301 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Nap1l5Q9JJF0 156 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Lypla2Q9WTL7 231 aa11.27□□□□□ -0.6
Cpsf3-211ENSMUST00000222968 Scn3aA2ASI5 1947 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Atrnl1Q6A051 1378 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Apol10bG3X9K7 334 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 AoahO35298 574 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Cdr2P97817 455 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Kcnma1Q08460 1209 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Papd7Q6PB75 542 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Haus4Q8BFT2 363 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Cc2d1bQ8BRN9 848 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 IarsQ8BU30 1262 aa11.27□□□□□ -0.61
Cpsf3-211ENSMUST00000222968 Znf131Q8K3J5 619 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms