RNA–Protein interactions for RNA: ENSMUST00000163559.7

Ccr9-202, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-202ENSMUST00000163559 CoasyQ9DBL7 563 aa17.12■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Cacna1sQ02789 1880 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Dnai2A2AC93 623 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Pip4k2aO70172 405 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Hmgb1P63158 215 aaKnown RBP17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Tshz1Q5DTH5 1084 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ccdc42Q5SV66 316 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Rexo1Q7TT28 1213 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Armcx3Q8BHS6 379 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Afg3l2Q8JZQ2 802 aaKnown RBP17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Creb3l3Q91XE9 479 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Josd2Q9CR30 188 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Zcrb1Q9CZ96 217 aaKnown RBP17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ccdc88cQ6VGS5 2009 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ltbp2O08999 1813 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 AgtP11859 477 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Nap1l1P28656 391 aaKnown RBP17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Rfc1P35601 1131 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ighmbp2P40694 993 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Gtpbp6Q3U6U5 514 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Arglu1Q3UL36 271 aaKnown RBP17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Tsr1Q5SWD9 803 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Herc4Q6PAV2 1057 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Camsap3Q80VC9 1252 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 1700020D05RikQ99PB1 294 aa17.11■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Snx12O70493 165 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 ItgadQ3V0T4 1168 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Tcp10aQ80W76 438 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Parp10Q8CIE4 960 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Eif3cQ8R1B4 911 aaKnown RBP17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Znf704Q9ERQ3 566 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 GabreA2AMW3 916 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Zfp408H7BX78 710 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Lig1P37913 916 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Nap1l2P51860 460 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 PtgdrP70263 357 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Rnf40Q3U319 1001 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Stxbp3Q60770 592 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 HrQ61645 1182 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 D130040H23RikQ8BII3 405 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Traf3ip3Q8C0G2 513 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Xrcc4Q924T3 326 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ppp1r3gQ9CW07 347 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Galnt15Q9D2N8 638 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Acot3Q9QYR7 432 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Psma7Q9Z2U0 248 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Gm5114W4VSN8 858 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Atp6v0a2P15920 856 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Emc10Q3TAS6 258 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Naa35Q6PHQ8 725 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Stx17Q9D0I4 301 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Golga5Q9QYE6 729 aa17.1■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Odf2A3KGV1 830 aaKnown RBP17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Sec24cG3X972 1096 aaKnown RBP17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Sema6bO54951 886 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Psg29Q3URN6 468 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Papd7Q6PB75 542 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Actn1Q7TPR4 892 aaKnown RBP17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ttll1Q91V51 423 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Plagl2Q925T4 496 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 ToporslQ9D2F8 683 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Nfxl1E9Q8I7 918 aaKnown RBP17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ranbp1P34022 203 aaKnown RBP17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 EgfrQ01279 1210 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Trpc6Q61143 930 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Lca5Q80ST9 704 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Haus4Q8BFT2 363 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Mrvi1Q9WUX5 899 aaKnown RBP17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Slc12a7Q9WVL3 1083 aa17.09■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Map7d2A2AG50 781 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Sema3fO88632 785 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Psmc6P62334 389 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Cct5P80316 541 aaKnown RBP17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Kcnma1Q08460 1209 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Gcnt1Q09324 428 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Mapk6Q61532 720 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Pacsin1Q61644 441 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Hoxa13Q62424 386 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Tm4sf1Q64302 202 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Recql4Q75NR7 1216 aaKnown RBP17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Prdm4Q80V63 803 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ift74Q8BKE9 600 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Stap2Q8R0L1 411 aa17.08■□□□□ 0.33
Ccr9-202ENSMUST00000163559 Ccdc24E9PUW8 296 aa17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Gad1P48318 593 aa17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Wdhd1P59328 1117 aa17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Mettl25Q6NXH8 597 aa17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Ifih1Q8R5F7 1025 aa17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Add1Q9QYC0 735 aaKnown RBP17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 BcamQ9R069 622 aa17.08■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Guca2bO09051 106 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Kif3cO35066 796 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Vgll3P85442 326 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Tcerg1lQ3B807 590 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Tbc1d9bQ5SVR0 1263 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Ncapg2Q6DFV1 1138 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 NfrkbQ6PIJ4 1296 aaKnown RBP17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Tlr13Q6R5N8 991 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 Haus2Q9CQS9 234 aa17.07■□□□□ 0.32
Ccr9-202ENSMUST00000163559 RnmtQ9D0L8 465 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms