RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Eif2ak1Q9Z2R9 619 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Smchd1Q6P5D8 2007 aaKnown RBP11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Gjd2O54851 321 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Cdc25aP48964 514 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kif5bQ61768 963 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Snx13Q6PHS6 957 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Extl2Q9ES89 330 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Adamts10P58459 1104 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Cdc14aQ6GQT0 603 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ubap2lQ80X50 1107 aaKnown RBP11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Cdca8Q8BHX3 289 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Traf7Q922B6 594 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 PycardQ9EPB4 193 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Nap1l5Q9JJF0 156 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Cabp5Q9JLK3 173 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Col11a1Q61245 1804 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Atp9aO70228 1047 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Trappc3lQ4KL14 181 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Rgl2Q61193 778 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ubxn4Q8VCH8 506 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Tesk2Q8VCT9 570 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Scrn1Q9CZC8 414 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Dusp10Q9ESS0 483 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Miga1Q4QQM5 600 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Large1Q9Z1M7 756 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Cyp2j7A0A140T8U1 504 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Epb41l2O70318 988 aaKnown RBP11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 SfnO70456 248 aaKnown RBP11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Mpp3O88910 568 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Tal1P22091 329 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Sdc2P43407 202 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Lmntd2Q0VET5 664 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 MaeaQ4VC33 396 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ecm1Q61508 559 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Trak2Q6P9N8 913 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Olfr119Q7TRJ5 321 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ddx19bQ8BZY3 494 aa11.15□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 SsbP32067 415 aaKnown RBP11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Psmc2P46471 433 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 PdgfcQ8CI19 345 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 AunipE9Q6Z5 340 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Gm10436L7N1Y3 520 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Mettl14Q3UIK4 456 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Cyfip1Q7TMB8 1253 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Mrpl58Q8R035 206 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Cacnb1Q8R3Z5 597 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Katnbl1Q9CWJ3 299 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 SlkO54988 1233 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Recql4Q75NR7 1216 aaKnown RBP11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Txndc16Q7TN22 820 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Med24Q99K74 987 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Ggps1Q9WTN0 300 aa11.14□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Cntnap5cQ0V8T7 1305 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Rabgap1A2AWA9 1064 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Skor2A7M7C7 1008 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Mcm6P97311 821 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Zfp90Q61967 636 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 GypcQ78HU7 95 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Adam39Q7M762 756 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Krt79Q8VED5 531 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Slc25a38Q91XD8 326 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Josd2Q9CR30 188 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Spocd1B1ASB6 936 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Stra6O70491 670 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Lig1P37913 916 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Clec16aQ80U30 1036 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Kdm4bQ91VY5 1086 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Znhit2Q9QY66 399 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Sycp2lA0A0M3U1B0 842 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Gm3095E9Q058 166 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Setd4P58467 439 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 YdjcQ14BV6 310 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Mrgprb1Q3UG61 350 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Tfe3Q64092 572 aaKnown RBP11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Asic1Q6NXK8 526 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Tdp1Q8BJ37 609 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Fbxo18Q8K2I9 1042 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Dnajc17Q91WT4 303 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Tubgcp2Q921G8 905 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Q9D5Q8 446 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 SetQ9EQU5 289 aaKnown RBP11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Nudt5Q9JKX6 218 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Add3Q9QYB5 706 aaKnown RBP11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Atp12aQ9Z1W8 1035 aa11.13□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Wfdc16A2A5H4 111 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Nfx1B1AY10 1114 aaKnown RBP11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Acsl1P41216 699 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Tyro3P55144 880 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Tmem109Q3UBX0 243 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Rnf207Q3V3A7 635 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Zdhhc15Q8BGJ0 337 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Caps2Q8BUG5 550 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Ccdc122Q8BVN0 290 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Podxl2Q8CAE9 603 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Ces4aQ8R0W5 563 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Map3k20Q9ESL4 802 aaKnown RBP11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Psmc4P54775 418 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Rrp1P56183 494 aaKnown RBP11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Lrrc14bQ3UJB3 510 aa11.12□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Ece2Q80Z60 881 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms