RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rnf40Q3U319 1001 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Otop3Q80UF9 577 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Csgalnact2Q8C1F4 542 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Spata32Q8C5V0 334 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Magi2Q9WVQ1 1275 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tph1P17532 447 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Celf1P28659 486 aaKnown RBP11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 NsfP46460 744 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gucy2cQ3UWA6 1072 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ankrd13cQ3UX43 541 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc92bQ5SUE3 299 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ces3aQ63880 571 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ehd2Q8BH64 543 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Dars2Q8BIP0 653 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tmem63cQ8CBX0 802 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tcp11l2Q8K1H7 517 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ces3bQ8VCU1 571 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Smc6Q924W5 1097 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 CoasyQ9DBL7 563 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gm6583E9Q8Z1 469 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Fhdc1Q3ULZ2 1149 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Arl8aQ8VEH3 186 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Filip1Q9CS72 1211 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tnfrsf10bQ9QZM4 381 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cacna2d3Q9Z1L5 1091 aa11.23□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Kcnk16G5E845 292 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Exoc4O35382 975 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cacna2d2Q6PHS9 1154 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 WdpcpQ8C456 722 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cdk5rap2Q8K389 1822 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Grin2dQ03391 1323 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Gm28042B7ZCM9 1014 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Zfp174B9EJW5 407 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Drc1Q3USS3 753 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Frmd7A2AD83 703 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 GalcP54818 684 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Adcy8P97490 1249 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ddx3yQ62095 658 aaKnown RBP11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 BaatQ91X34 420 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 MefvQ9JJ26 767 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Parp14Q2EMV9 1817 aa11.22□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Krt24A1L317 512 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Fyb2A2A995 729 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Plekha5E9Q6H8 1269 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ess2O70279 479 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccna1Q61456 421 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 DgkiD3YWQ0 1071 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Cdh15P33146 784 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Crybg3Q80W49 1005 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Usp33Q8R5K2 909 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ddah1Q9CWS0 285 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Pabpc1lA2A5N3 607 aaKnown RBP11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Atf2P16951 487 aaKnown RBP11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ddit3P35639 168 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Ccdc110Q3V125 848 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Rapgef5Q8C0Q9 814 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Znf428Q8C1M2 176 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Tmem134Q8R0J4 195 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Dr1Q91WV0 176 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 IdeQ9JHR7 1019 aa11.21□□□□□ -0.61
Ccdc40-201ENSMUST00000035935 Speer4f2E9Q366 295 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tfdp1Q08639 410 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 CtcfQ61164 736 aaKnown RBP11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Dzip3Q7TPV2 1204 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Eif2aQ8BJW6 581 aaKnown RBP11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Q8C5C9 218 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 MbipQ99LQ1 341 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rsrc1Q9DBU6 334 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tsc1Q9EP53 1161 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cul1Q9WTX6 776 aa11.21□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Grem2O88273 168 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 TxkP42682 527 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Stmn2P55821 179 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Serpina9Q9D7D2 418 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Zfyve19Q9DAZ9 389 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Ddx25Q9QY15 484 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cdc27A2A6Q5 825 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cdr1E9Q0B4 517 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Kif23E9Q5G3 953 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 PtgdrP70263 357 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 NyxP83503 476 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Olfr119Q7TRJ5 321 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Q8C6G1 249 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Trim68Q8K243 485 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Dnajc17Q91WT4 303 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Thap2Q9D305 217 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Gkap1Q9JMB0 366 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Fem1bQ9Z2G0 627 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Taf4E9QAP7 1042 aaKnown RBP11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cdk4P30285 303 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Mcl1P97287 331 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rgl1Q60695 768 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Vmn1r199Q8R280 367 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Creb3l3Q91XE9 479 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Rnf6Q9DBU5 667 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Plagl1Q9JLQ4 704 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Arhgap33Q80YF9 1305 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Krt36B1AQ75 473 aa11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Cpsf2O35218 782 aaKnown RBP11.2□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Snx12O70493 165 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 111.2 ms