RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G GFD2P25370 566 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G GUT2P32191 649 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G BEM3P32873 1128 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G YPT52P36018 234 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G APD1P38281 316 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G REI1P38344 393 aaPredicted RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G MEF2P39677 819 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G PRP39P39682 629 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G DLD3P39976 496 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G PRE6P40303 254 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G TED1P40533 473 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G MNT3P40549 630 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G PAC11P40960 533 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G GDS1P41913 522 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G CCT8P47079 568 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G RAD17P48581 401 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G YGR079WP53249 370 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G YNL247WP53852 767 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G MET14Q02196 202 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G IVY1Q04934 453 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G YDR278CQ05612 105 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G ISR1Q06098 443 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G BUD20Q08004 166 aaPredicted RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G ATG29Q12092 213 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G PAR32Q12515 295 aaKnown RBP2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G MTR10Q99189 972 aa2.94□□□□□ -1.94
tC(GCA)GtC(GCA)G HEM4P06174 275 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G RPB2P08518 1224 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G ERG20P08524 352 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G YSF3P0C074 85 aaPredicted RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G RPS21AP0C0V8 87 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G NSP1P14907 823 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G TPS2P31688 896 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G DBF20P32328 564 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G NDI1P32340 513 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G RAD5P32849 1169 aaPredicted RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G LOT5P34234 306 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G YET1P35723 206 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G KKQ8P36004 724 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G ALG3P38179 458 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G YBR062CP38239 180 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G YHR112CP38716 378 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G SEO1P39709 593 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G MDV1P47025 714 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G RNR4P49723 345 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G LYS5P50113 272 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G MPS2P53159 387 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G MNT4P53745 580 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G PFA5Q03289 374 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G VPS16Q03308 798 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G APC4Q04601 652 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G YPR078CQ06813 372 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G RRP40Q08285 240 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G NOB1Q08444 459 aaKnown RBP2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G REX3Q12090 404 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G YDR215CQ12240 137 aa2.93□□□□□ -1.94
tC(GCA)GtC(GCA)G SSC1P0CS90 654 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G PRP6P19735 899 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G APN1P22936 367 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G GPI12P23797 304 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G PUB1P32588 453 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
tC(GCA)GtC(GCA)G EMP70P32802 667 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G SPC29P33419 253 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G PEX5P35056 612 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G THI80P35202 319 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G GLG1P36143 616 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G OMA1P36163 345 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G MAK5P38112 773 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G TSL1P38427 1098 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G DIA4P38705 446 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G GGC1P38988 300 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G AVT7P40501 490 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G YJR141WP47172 347 aaPredicted RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G PGU1P47180 361 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G DUO1P53168 247 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G YGR015CP53208 328 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G YNR021WP53723 404 aaKnown RBP2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G YPL107WQ02873 248 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G THI7Q05998 598 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G SEI1Q06058 285 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G ADY3Q07732 790 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G YLL056CQ12177 298 aa2.92□□□□□ -1.94
tC(GCA)GtC(GCA)G LEU4P06208 619 aaKnown RBP2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G GAL3P13045 520 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G CTA1P15202 515 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G VPS33P20795 691 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G DBF4P32325 704 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G RRP1P35178 278 aaPredicted RBP2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G AUR1P36107 401 aaPredicted RBP2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G JNM1P36224 373 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G ARL1P38116 183 aaKnown RBP2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G YSW1P38280 609 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G PMC1P38929 1173 aaPredicted RBP2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G FRT2P39734 528 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G NDE1P40215 560 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G JEM1P40358 645 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G RIC1P40395 1056 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G VHR1P40522 640 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G APQ12P40532 138 aa2.91□□□□□ -1.94
tC(GCA)GtC(GCA)G YIR020CP40575 100 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms