RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	RCL1	Q08096	367 aa	Predicted RBP	4.94	□□□□□ -1.62
GDB1	YPR184W	YPL199C	Q08954	240 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	RRI1	Q12468	440 aa		4.94	□□□□□ -1.62
GDB1	YPR184W	ERR1	P0CX10	437 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	ERR2	P0CX11	437 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	GUK1	P15454	187 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	OMA1	P36163	345 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	FLR1	P38124	548 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TAE1	P38340	232 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	PEP8	P40335	379 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	FMC1	P40491	155 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	NEO1	P40527	1151 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	ERR3	P42222	437 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	ALR2	P43553	858 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	MFB1	Q04922	465 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	SWC7	Q06707	132 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	FEX1	Q08913	375 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	MSF1	P08425	469 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	MET2	P08465	486 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	ETR1	P38071	380 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	YBL029W	P38201	376 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	PTC2	P39966	464 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	EDC3	P39998	551 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	YGL039W	P53183	348 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	SNF12	P53628	566 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	RAD33	Q04231	177 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TAZ1	Q06510	381 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TRM8	Q12009	286 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TRK2	P28584	889 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	VPH2	P32341	215 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	YBR225W	P38321	900 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	INM1	P38710	295 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	YHR131C	P38835	850 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	YIL166C	P40445	542 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	RRN5	Q02983	363 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	HMO1	Q03973	246 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	YDR514C	Q04408	483 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	GIC2	Q06648	383 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	THI73	Q07904	523 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	ACF2	Q12168	779 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	PDE2	P06776	526 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	PBS2	P08018	668 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	YFR010W-A	P0C5N0	62 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	GLN3	P18494	730 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	AMD2	P22580	549 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TCD2	P36101	447 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	NAT2	P37293	288 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	COS111	P38308	924 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TSL1	P38427	1098 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	AIM18	P38884	321 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	DLD3	P39976	496 aa	Known RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	RGI1	P40043	161 aa	Predicted RBP	4.93	□□□□□ -1.62
GDB1	YPR184W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
GDB1	YPR184W	PEX13	P80667	386 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	YMR187C	Q03236	431 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	TVP15	Q03860	143 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	PIB1	Q06651	286 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	GPM3	Q12326	303 aa		4.93	□□□□□ -1.62
GDB1	YPR184W	KIN2	P13186	1147 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	PET9	P18239	318 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	RPB10	P22139	70 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	CYS3	P31373	394 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	SFP1	P32432	683 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	HIR2	P32480	875 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	LAG1	P38703	411 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	PCF11	P39081	626 aa	Predicted RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	YER186C	P40101	306 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	IDP2	P41939	412 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	CSL4	P53859	292 aa	Predicted RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	NUP116	Q02630	1113 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	YDR222W	Q04925	415 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	UTP21	Q06078	939 aa	Predicted RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	RAD59	Q12223	238 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	AI3	P03877	415 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	PRB1	P09232	635 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	EST1	P17214	699 aa	Predicted RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	HBS1	P32769	611 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	ATO2	P32907	282 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SPT10	P35208	640 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	YHR020W	P38708	688 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	YEL020C	P39994	560 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	ALG5	P40350	334 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	STR2	P47164	639 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	MNT2	P53059	558 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	ARE2	P53629	642 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	PDH1	Q12428	516 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	UBR2	Q07963	1872 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SEC53	P07283	254 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	SGV1	P23293	657 aa	Known RBP	4.92	□□□□□ -1.62
GDB1	YPR184W	MGR1	P25573	417 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	YKL063C	P35725	167 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	YBR056W	P38081	501 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	MDM31	P38880	579 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	CCT6	P39079	546 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	MEP2	P41948	499 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SFH5	P47008	294 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	SSL2	Q00578	843 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	HER1	Q12276	1246 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	ATG31	Q12421	196 aa		4.92	□□□□□ -1.62
GDB1	YPR184W	COX4	P04037	155 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms