RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	QRI1	P43123	477 aa	Known RBP	5.21	□□□□□ -1.58
UBA3	YPR066W	CUE3	P53137	624 aa	Known RBP	5.21	□□□□□ -1.58
UBA3	YPR066W	YDR131C	Q03899	556 aa		5.21	□□□□□ -1.58
UBA3	YPR066W	TOR1	P35169	2470 aa		5.21	□□□□□ -1.58
UBA3	YPR066W	YER145C-A	A0A023PYF4	145 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	GAL80	P04387	435 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	MRP2	P10663	115 aa	Predicted RBP	5.2	□□□□□ -1.58
UBA3	YPR066W	TCP1	P12612	559 aa	Known RBP	5.2	□□□□□ -1.58
UBA3	YPR066W	SSE2	P32590	693 aa	Known RBP	5.2	□□□□□ -1.58
UBA3	YPR066W	PEX2	P32800	271 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	GCS1	P35197	352 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	YKL050C	P35736	922 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	VID24	P38263	362 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	ELO1	P39540	310 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	RTT102	P53330	157 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	NCS2	P53923	493 aa	Predicted RBP	5.2	□□□□□ -1.58
UBA3	YPR066W	YLR455W	Q06188	304 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	FMP40	Q08968	688 aa	Predicted RBP	5.2	□□□□□ -1.58
UBA3	YPR066W	AVL9	Q12500	764 aa		5.2	□□□□□ -1.58
UBA3	YPR066W	HIS4	P00815	799 aa	Known RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	BI2	P03873	423 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	RPL4A	P10664	362 aa	Known RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	MRP13	P12686	339 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	CKA2	P19454	339 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	PUP3	P25451	205 aa	Known RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	ADY2	P25613	283 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	ADK2	P26364	225 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	YBR144C	P34215	104 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	TCD2	P36101	447 aa	Known RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	STU2	P46675	888 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	TAX4	P47030	604 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	RPL4B	P49626	362 aa	Known RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	ORC5	P50874	479 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	NBP1	P52919	319 aa	Predicted RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	VID30	P53076	958 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	HOS2	P53096	452 aa	Predicted RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	TOF1	P53840	1238 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	ECM22	Q05958	814 aa	Predicted RBP	5.19	□□□□□ -1.58
UBA3	YPR066W	YLH47	Q06493	454 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	YLR111W	Q12528	110 aa		5.19	□□□□□ -1.58
UBA3	YPR066W	DPH2	P32461	534 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	COT1	P32798	439 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	RFT1	P38206	574 aa	Predicted RBP	5.18	□□□□□ -1.58
UBA3	YPR066W	YER186C	P40101	306 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	LTP1	P40347	161 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	LCB2	P40970	561 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	SMC3	P47037	1230 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	PET130	P47065	347 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	APT1	P49435	187 aa	Known RBP	5.18	□□□□□ -1.58
UBA3	YPR066W	IMD4	P50094	524 aa	Known RBP	5.18	□□□□□ -1.58
UBA3	YPR066W	BOP3	P53958	396 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	PFA5	Q03289	374 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	YDR239C	Q03780	787 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	DPB4	Q04603	196 aa	Known RBP	5.18	□□□□□ -1.58
UBA3	YPR066W	ECM7	Q06200	448 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	BSP1	Q06604	576 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	GRC3	Q07845	632 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	SMC5	Q08204	1093 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	YOL075C	Q08234	1294 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	RLM1	Q12224	676 aa		5.18	□□□□□ -1.58
UBA3	YPR066W	TOR2	P32600	2474 aa	Known RBP	5.17	□□□□□ -1.58
UBA3	YPR066W	YCR006C	P25350	157 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	BMH1	P29311	267 aa	Known RBP	5.17	□□□□□ -1.58
UBA3	YPR066W	YSC83	P32792	385 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	CSE2	P33308	149 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	WBP1	P33767	430 aa	Known RBP	5.17	□□□□□ -1.58
UBA3	YPR066W	SEF1	P34228	1148 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	MRX3	P38172	270 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	MUM2	P38236	366 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	APD1	P38281	316 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	IPI3	P53877	555 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	SNU56	Q03782	492 aa	Known RBP	5.17	□□□□□ -1.58
UBA3	YPR066W	PDR8	Q06149	701 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	ATG29	Q12092	213 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	LEU9	Q12166	604 aa	Known RBP	5.17	□□□□□ -1.58
UBA3	YPR066W	HIF1	Q12373	385 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	NBL1	Q3E7Y6	73 aa		5.17	□□□□□ -1.58
UBA3	YPR066W	GPA1	P08539	472 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	PDA1	P16387	420 aa	Known RBP	5.16	□□□□□ -1.58
UBA3	YPR066W	STE50	P25344	346 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	RSA4	P25382	515 aa	Known RBP	5.16	□□□□□ -1.58
UBA3	YPR066W	IMG1	P25626	169 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	MRE11	P32829	692 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	PMT1	P33775	817 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	PXL1	P36166	706 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	ARP1	P38696	384 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	ALG5	P40350	334 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	FAR3	P46671	204 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	YML6	P51998	286 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	CUL3	P53202	744 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	NNF2	P53253	936 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	YTP1	P53584	459 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	VTC3	Q02725	835 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	YLR345W	Q06137	509 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	CUR1	Q06469	252 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	DAP1	Q12091	152 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	YLR049C	Q12110	428 aa		5.16	□□□□□ -1.58
UBA3	YPR066W	RAP1	P11938	827 aa		5.15	□□□□□ -1.59
UBA3	YPR066W	DBF4	P32325	704 aa		5.15	□□□□□ -1.59
UBA3	YPR066W	PXA2	P34230	853 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms